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Cluster: HRGMv2_2075_CGC22

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2075_8 HRGMv2_2075_8_61 69366 71111 - CBM34 | GH13_20
TC HRGMv2_2075_8 HRGMv2_2075_8_62 71130 71972 - 3.A.1.1.2
TC HRGMv2_2075_8 HRGMv2_2075_8_63 71969 72898 - 3.A.1.1.2
TC HRGMv2_2075_8 HRGMv2_2075_8_64 72952 74211 - 3.A.1.1.16
pfam HRGMv2_2075_8 HRGMv2_2075_8_65 74260 75450 - CBM26 | CBM26 | CBM26
TC HRGMv2_2075_8 HRGMv2_2075_8_66 75998 78259 - 2.A.6.4.2
Gene ID: HRGMv2_2075_8_61
Type: CAZyme
Location: 69366 - 71111 (-)
Gene ID: HRGMv2_2075_8_62
Type: TC
Location: 71130 - 71972 (-)
Gene ID: HRGMv2_2075_8_63
Type: TC
Location: 71969 - 72898 (-)
Gene ID: HRGMv2_2075_8_64
Type: TC
Location: 72952 - 74211 (-)
Gene ID: HRGMv2_2075_8_65
Type: pfam
Location: 74260 - 75450 (-)
Gene ID: HRGMv2_2075_8_66
Type: TC
Location: 75998 - 78259 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_2075_8_61 vegetarian > vegan 1.14618 0.00229
HRGMv2_2075_8_62 vegetarian > vegan 1.12388 0.00229
HRGMv2_2075_8_64 vegetarian > vegan 1.09816 0.00229
HRGMv2_2075_8_65 vegetarian > vegan 1.10809 0.00229

🧭 Explore Read Mapping of CGC

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