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Cluster: HRGMv2_2075_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2075_7 HRGMv2_2075_7_61 75353 76816 - 9.A.11.1.1
pfam HRGMv2_2075_7 HRGMv2_2075_7_62 76918 77505 - Mntp | Mntp
TC HRGMv2_2075_7 HRGMv2_2075_7_63 77591 78736 + 2.A.45.2.6
pfam HRGMv2_2075_7 HRGMv2_2075_7_64 78809 79369 + DUF436
CAZyme HRGMv2_2075_7 HRGMv2_2075_7_65 79372 80544 - GH5_2
pfam HRGMv2_2075_7 HRGMv2_2075_7_66 80747 82171 + Methyltr_RsmB-F | Methyltranf_PUA | Methyltr_RsmF_N | RsmF_methylt_CI
pfam HRGMv2_2075_7 HRGMv2_2075_7_67 82244 83014 + PseudoU_synth_2
TC HRGMv2_2075_7 HRGMv2_2075_7_68 83060 84142 + 2.A.86.1.9
Gene ID: HRGMv2_2075_7_61
Type: TC
Location: 75353 - 76816 (-)
Gene ID: HRGMv2_2075_7_62
Type: pfam
Location: 76918 - 77505 (-)
Gene ID: HRGMv2_2075_7_63
Type: TC
Location: 77591 - 78736 (+)
Gene ID: HRGMv2_2075_7_64
Type: pfam
Location: 78809 - 79369 (+)
Gene ID: HRGMv2_2075_7_65
Type: CAZyme
Location: 79372 - 80544 (-)
Gene ID: HRGMv2_2075_7_66
Type: pfam
Location: 80747 - 82171 (+)
Gene ID: HRGMv2_2075_7_67
Type: pfam
Location: 82244 - 83014 (+)
Gene ID: HRGMv2_2075_7_68
Type: TC
Location: 83060 - 84142 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_2075_7_67 vegetarian > vegan 1.29697 0.00229
HRGMv2_2075_7_68 vegetarian > vegan 1.46551 0.00229

🧭 Explore Read Mapping of CGC

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