Cluster: HRGMv2_2075_CGC17
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2075
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2075_6 | HRGMv2_2075_6_50 | 54741 | 56285 | + | 3.A.1.2.17 |
| TC | HRGMv2_2075_6 | HRGMv2_2075_6_51 | 56269 | 57372 | + | 3.A.1.2.12 |
| pfam | HRGMv2_2075_6 | HRGMv2_2075_6_52 | 57375 | 58376 | + | BPD_transp_2 |
| CAZyme | HRGMv2_2075_6 | HRGMv2_2075_6_53 | 58566 | 59771 | + | GT4 |
| pfam | HRGMv2_2075_6 | HRGMv2_2075_6_54 | 59716 | 60315 | + | VTT_dom |
| CAZyme | HRGMv2_2075_6 | HRGMv2_2075_6_55 | 60328 | 61332 | + | GT4 |
| TC | HRGMv2_2075_6 | HRGMv2_2075_6_56 | 61400 | 61885 | + | 2.A.115.2.14 |
Gene ID: HRGMv2_2075_6_50
Type: TC
Location: 54741 - 56285 (+)
Type: TC
Location: 54741 - 56285 (+)
Gene ID: HRGMv2_2075_6_51
Type: TC
Location: 56269 - 57372 (+)
Type: TC
Location: 56269 - 57372 (+)
Gene ID: HRGMv2_2075_6_52
Type: pfam
Location: 57375 - 58376 (+)
Type: pfam
Location: 57375 - 58376 (+)
Gene ID: HRGMv2_2075_6_53
Type: CAZyme
Location: 58566 - 59771 (+)
Type: CAZyme
Location: 58566 - 59771 (+)
Gene ID: HRGMv2_2075_6_54
Type: pfam
Location: 59716 - 60315 (+)
Type: pfam
Location: 59716 - 60315 (+)
Gene ID: HRGMv2_2075_6_55
Type: CAZyme
Location: 60328 - 61332 (+)
Type: CAZyme
Location: 60328 - 61332 (+)
Gene ID: HRGMv2_2075_6_56
Type: TC
Location: 61400 - 61885 (+)
Type: TC
Location: 61400 - 61885 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Acetatifactor
Species
Acetatifactor sp003447295
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.