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Cluster: HRGMv2_2073_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2073_10 HRGMv2_2073_10_3 2386 4197 + 3.A.1.106.14
TC HRGMv2_2073_10 HRGMv2_2073_10_4 4184 5863 + 3.A.1.135.9
TC HRGMv2_2073_10 HRGMv2_2073_10_5 5853 7226 - 2.A.22.5.3
TF HRGMv2_2073_10 HRGMv2_2073_10_6 7563 8111 + SpoVT_AbrB
pfam HRGMv2_2073_10 HRGMv2_2073_10_7 8274 9569 + AAA_14 | DUF4143
TC HRGMv2_2073_10 HRGMv2_2073_10_8 9613 10908 - 9.B.34.1.2
pfam HRGMv2_2073_10 HRGMv2_2073_10_9 11431 14583 + tRNA-synt_1 | Anticodon_1 | tRNA-synt_1g | tRNA-synt_1g | DUF5915
CAZyme HRGMv2_2073_10 HRGMv2_2073_10_10 14814 17318 + GT35
Gene ID: HRGMv2_2073_10_3
Type: TC
Location: 2386 - 4197 (+)
Gene ID: HRGMv2_2073_10_4
Type: TC
Location: 4184 - 5863 (+)
Gene ID: HRGMv2_2073_10_5
Type: TC
Location: 5853 - 7226 (-)
Gene ID: HRGMv2_2073_10_6
Type: TF
Location: 7563 - 8111 (+)
Gene ID: HRGMv2_2073_10_7
Type: pfam
Location: 8274 - 9569 (+)
Gene ID: HRGMv2_2073_10_8
Type: TC
Location: 9613 - 10908 (-)
Gene ID: HRGMv2_2073_10_9
Type: pfam
Location: 11431 - 14583 (+)
Gene ID: HRGMv2_2073_10_10
Type: CAZyme
Location: 14814 - 17318 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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