Cluster: HRGMv2_2073_CGC7
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_2073
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2073_8 | HRGMv2_2073_8_8 | 6868 | 8034 | - | CBM35inCE17 | CE17 |
| CAZyme | HRGMv2_2073_8 | HRGMv2_2073_8_9 | 8085 | 9107 | - | GH130_2 |
| CAZyme | HRGMv2_2073_8 | HRGMv2_2073_8_10 | 9133 | 10308 | - | GH130_1 |
| pfam | HRGMv2_2073_8 | HRGMv2_2073_8_11 | 10302 | 11486 | - | GlcNAc_2-epim |
| TC | HRGMv2_2073_8 | HRGMv2_2073_8_12 | 11507 | 12373 | - | 3.A.1.1.47 |
| TC | HRGMv2_2073_8 | HRGMv2_2073_8_13 | 12375 | 13385 | - | 3.A.1.1.20 |
Gene ID: HRGMv2_2073_8_8
Type: CAZyme
Location: 6868 - 8034 (-)
Type: CAZyme
Location: 6868 - 8034 (-)
Gene ID: HRGMv2_2073_8_9
Type: CAZyme
Location: 8085 - 9107 (-)
Type: CAZyme
Location: 8085 - 9107 (-)
Gene ID: HRGMv2_2073_8_10
Type: CAZyme
Location: 9133 - 10308 (-)
Type: CAZyme
Location: 9133 - 10308 (-)
Gene ID: HRGMv2_2073_8_11
Type: pfam
Location: 10302 - 11486 (-)
Type: pfam
Location: 10302 - 11486 (-)
Gene ID: HRGMv2_2073_8_12
Type: TC
Location: 11507 - 12373 (-)
Type: TC
Location: 11507 - 12373 (-)
Gene ID: HRGMv2_2073_8_13
Type: TC
Location: 12375 - 13385 (-)
Type: TC
Location: 12375 - 13385 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Acetatifactor
Species
Acetatifactor intestinalis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.