Cluster: HRGMv2_2073_CGC6
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2073
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2073_6 | HRGMv2_2073_6_56 | 53778 | 56555 | - | 3.A.12.1.1 |
| peptidase | HRGMv2_2073_6 | HRGMv2_2073_6_57 | 56675 | 57400 | - | S14.UPW |
| NULL(UNKNOWN) | HRGMv2_2073_6 | HRGMv2_2073_6_58 | 57496 | 58986 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_2073_6 | HRGMv2_2073_6_59 | 58986 | 59930 | - | GT2 |
| peptidase | HRGMv2_2073_6 | HRGMv2_2073_6_60 | 59954 | 60682 | - | M20.UNW |
| TC | HRGMv2_2073_6 | HRGMv2_2073_6_61 | 60764 | 62164 | - | 9.A.40.2.1 |
Gene ID: HRGMv2_2073_6_56
Type: TC
Location: 53778 - 56555 (-)
Type: TC
Location: 53778 - 56555 (-)
Gene ID: HRGMv2_2073_6_57
Type: peptidase
Location: 56675 - 57400 (-)
Type: peptidase
Location: 56675 - 57400 (-)
Gene ID: HRGMv2_2073_6_58
Type:
Location: 57496 - 58986 (-)
Type:
Location: 57496 - 58986 (-)
Gene ID: HRGMv2_2073_6_59
Type: CAZyme
Location: 58986 - 59930 (-)
Type: CAZyme
Location: 58986 - 59930 (-)
Gene ID: HRGMv2_2073_6_60
Type: peptidase
Location: 59954 - 60682 (-)
Type: peptidase
Location: 59954 - 60682 (-)
Gene ID: HRGMv2_2073_6_61
Type: TC
Location: 60764 - 62164 (-)
Type: TC
Location: 60764 - 62164 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Acetatifactor
Species
Acetatifactor intestinalis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.