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Cluster: HRGMv2_2073_CGC37

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2073_45 HRGMv2_2073_45_6 3215 4684 - 2.A.66.2.16
NULL(UNKNOWN) HRGMv2_2073_45 HRGMv2_2073_45_7 4722 6089 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2073_45 HRGMv2_2073_45_8 6127 7077 - GT2
CAZyme HRGMv2_2073_45 HRGMv2_2073_45_9 7078 8259 - GT4
CAZyme HRGMv2_2073_45 HRGMv2_2073_45_10 8260 9447 - GT4
CAZyme HRGMv2_2073_45 HRGMv2_2073_45_11 9449 10510 - GT2
pfam HRGMv2_2073_45 HRGMv2_2073_45_12 10541 11767 - UDPG_MGDP_dh | NAD_Gly3P_dh_N | 3HCDH_N | UDPG_MGDP_dh_C | UDPG_MGDP_dh_N
TC HRGMv2_2073_45 HRGMv2_2073_45_13 11922 13373 - 9.B.18.1.2
TC HRGMv2_2073_45 HRGMv2_2073_45_14 13402 14115 - 8.A.3.2.3
Gene ID: HRGMv2_2073_45_6
Type: TC
Location: 3215 - 4684 (-)
Gene ID: HRGMv2_2073_45_7
Type:
Location: 4722 - 6089 (-)
Gene ID: HRGMv2_2073_45_8
Type: CAZyme
Location: 6127 - 7077 (-)
Gene ID: HRGMv2_2073_45_9
Type: CAZyme
Location: 7078 - 8259 (-)
Gene ID: HRGMv2_2073_45_10
Type: CAZyme
Location: 8260 - 9447 (-)
Gene ID: HRGMv2_2073_45_11
Type: CAZyme
Location: 9449 - 10510 (-)
Gene ID: HRGMv2_2073_45_12
Type: pfam
Location: 10541 - 11767 (-)
Gene ID: HRGMv2_2073_45_13
Type: TC
Location: 11922 - 13373 (-)
Gene ID: HRGMv2_2073_45_14
Type: TC
Location: 13402 - 14115 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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