Cluster: HRGMv2_2073_CGC33
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2073
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2073_37 | HRGMv2_2073_37_16 | 15169 | 15957 | - | CE1 |
| pfam | HRGMv2_2073_37 | HRGMv2_2073_37_17 | 16027 | 17034 | - | BPD_transp_2 |
| NULL(UNKNOWN) | HRGMv2_2073_37 | HRGMv2_2073_37_18 | 17130 | 18347 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2073_37 | HRGMv2_2073_37_19 | 18391 | 19353 | - | 3.A.1.2.16 |
| TC | HRGMv2_2073_37 | HRGMv2_2073_37_20 | 19364 | 20875 | - | 3.A.1.2.20 |
| CAZyme | HRGMv2_2073_37 | HRGMv2_2073_37_21 | 20918 | 22615 | - | GH3 |
Gene ID: HRGMv2_2073_37_16
Type: CAZyme
Location: 15169 - 15957 (-)
Type: CAZyme
Location: 15169 - 15957 (-)
Gene ID: HRGMv2_2073_37_17
Type: pfam
Location: 16027 - 17034 (-)
Type: pfam
Location: 16027 - 17034 (-)
Gene ID: HRGMv2_2073_37_18
Type:
Location: 17130 - 18347 (-)
Type:
Location: 17130 - 18347 (-)
Gene ID: HRGMv2_2073_37_19
Type: TC
Location: 18391 - 19353 (-)
Type: TC
Location: 18391 - 19353 (-)
Gene ID: HRGMv2_2073_37_20
Type: TC
Location: 19364 - 20875 (-)
Type: TC
Location: 19364 - 20875 (-)
Gene ID: HRGMv2_2073_37_21
Type: CAZyme
Location: 20918 - 22615 (-)
Type: CAZyme
Location: 20918 - 22615 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Acetatifactor
Species
Acetatifactor intestinalis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2073_37_16 | vegetarian > vegan | 2.64016 | 0.00566 |