Cluster: HRGMv2_2073_CGC30
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2073
- CGC Family ID: CGCFAM_07747
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2073_32 | HRGMv2_2073_32_7 | 12326 | 13129 | - | GT2 |
| peptidase | HRGMv2_2073_32 | HRGMv2_2073_32_8 | 13384 | 14919 | - | G05.UPW |
| pfam | HRGMv2_2073_32 | HRGMv2_2073_32_9 | 14966 | 15466 | - | GreA_GreB | GreA_GreB_N |
| TC | HRGMv2_2073_32 | HRGMv2_2073_32_10 | 15483 | 16448 | - | 9.B.146.1.3 |
| STP | HRGMv2_2073_32 | HRGMv2_2073_32_11 | 16696 | 17631 | + | NUDIX |
| pfam | HRGMv2_2073_32 | HRGMv2_2073_32_12 | 17620 | 19284 | - | MatE | Polysacc_synt | MurJ | Polysacc_synt_3 |
| CAZyme | HRGMv2_2073_32 | HRGMv2_2073_32_13 | 19311 | 20756 | - | GT5 |
Gene ID: HRGMv2_2073_32_7
Type: CAZyme
Location: 12326 - 13129 (-)
Type: CAZyme
Location: 12326 - 13129 (-)
Gene ID: HRGMv2_2073_32_8
Type: peptidase
Location: 13384 - 14919 (-)
Type: peptidase
Location: 13384 - 14919 (-)
Gene ID: HRGMv2_2073_32_9
Type: pfam
Location: 14966 - 15466 (-)
Type: pfam
Location: 14966 - 15466 (-)
Gene ID: HRGMv2_2073_32_10
Type: TC
Location: 15483 - 16448 (-)
Type: TC
Location: 15483 - 16448 (-)
Gene ID: HRGMv2_2073_32_11
Type: STP
Location: 16696 - 17631 (+)
Type: STP
Location: 16696 - 17631 (+)
Gene ID: HRGMv2_2073_32_12
Type: pfam
Location: 17620 - 19284 (-)
Type: pfam
Location: 17620 - 19284 (-)
Gene ID: HRGMv2_2073_32_13
Type: CAZyme
Location: 19311 - 20756 (-)
Type: CAZyme
Location: 19311 - 20756 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Acetatifactor
Species
Acetatifactor intestinalis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.