Cluster: HRGMv2_2073_CGC28
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2073
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2073_27 | HRGMv2_2073_27_8 | 7059 | 9524 | + | GH116 |
| STP | HRGMv2_2073_27 | HRGMv2_2073_27_9 | 9538 | 10878 | + | SBP_bac_1 |
| TC | HRGMv2_2073_27 | HRGMv2_2073_27_10 | 10945 | 11820 | + | 3.A.1.1.45 |
| TC | HRGMv2_2073_27 | HRGMv2_2073_27_11 | 11823 | 12665 | + | 3.A.1.1.18 |
| CAZyme | HRGMv2_2073_27 | HRGMv2_2073_27_12 | 12670 | 14988 | + | GH32 |
| TC | HRGMv2_2073_27 | HRGMv2_2073_27_13 | 15141 | 16343 | + | 8.A.59.4.1 |
Gene ID: HRGMv2_2073_27_8
Type: CAZyme
Location: 7059 - 9524 (+)
Type: CAZyme
Location: 7059 - 9524 (+)
Gene ID: HRGMv2_2073_27_9
Type: STP
Location: 9538 - 10878 (+)
Type: STP
Location: 9538 - 10878 (+)
Gene ID: HRGMv2_2073_27_10
Type: TC
Location: 10945 - 11820 (+)
Type: TC
Location: 10945 - 11820 (+)
Gene ID: HRGMv2_2073_27_11
Type: TC
Location: 11823 - 12665 (+)
Type: TC
Location: 11823 - 12665 (+)
Gene ID: HRGMv2_2073_27_12
Type: CAZyme
Location: 12670 - 14988 (+)
Type: CAZyme
Location: 12670 - 14988 (+)
Gene ID: HRGMv2_2073_27_13
Type: TC
Location: 15141 - 16343 (+)
Type: TC
Location: 15141 - 16343 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Acetatifactor
Species
Acetatifactor intestinalis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.