Cluster: HRGMv2_2073_CGC27
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2073
- CGC Family ID: CGCFAM_00307
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2073_26 | HRGMv2_2073_26_4 | 2652 | 4271 | + | 8.A.7.1.1 |
| sulfatase | HRGMv2_2073_26 | HRGMv2_2073_26_5 | 4279 | 5010 | + | S1_9 |
| CAZyme | HRGMv2_2073_26 | HRGMv2_2073_26_6 | 5032 | 6162 | + | CE9 |
| TC | HRGMv2_2073_26 | HRGMv2_2073_26_7 | 6156 | 6635 | + | 4.A.1.2.11 |
| TC | HRGMv2_2073_26 | HRGMv2_2073_26_8 | 6713 | 8182 | + | 4.A.1.1.7 |
| NULL(UNKNOWN) | HRGMv2_2073_26 | HRGMv2_2073_26_9 | 8308 | 8562 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_2073_26 | HRGMv2_2073_26_10 | 8583 | 9008 | - | GH166 |
Gene ID: HRGMv2_2073_26_4
Type: TC
Location: 2652 - 4271 (+)
Type: TC
Location: 2652 - 4271 (+)
Gene ID: HRGMv2_2073_26_5
Type: sulfatase
Location: 4279 - 5010 (+)
Type: sulfatase
Location: 4279 - 5010 (+)
Gene ID: HRGMv2_2073_26_6
Type: CAZyme
Location: 5032 - 6162 (+)
Type: CAZyme
Location: 5032 - 6162 (+)
Gene ID: HRGMv2_2073_26_7
Type: TC
Location: 6156 - 6635 (+)
Type: TC
Location: 6156 - 6635 (+)
Gene ID: HRGMv2_2073_26_8
Type: TC
Location: 6713 - 8182 (+)
Type: TC
Location: 6713 - 8182 (+)
Gene ID: HRGMv2_2073_26_9
Type:
Location: 8308 - 8562 (+)
Type:
Location: 8308 - 8562 (+)
Gene ID: HRGMv2_2073_26_10
Type: CAZyme
Location: 8583 - 9008 (-)
Type: CAZyme
Location: 8583 - 9008 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Acetatifactor
Species
Acetatifactor intestinalis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.