Cluster: HRGMv2_2073_CGC26
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2073
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2073_25 | HRGMv2_2073_25_10 | 11038 | 11916 | - | 3.A.1.1.20 |
| TC | HRGMv2_2073_25 | HRGMv2_2073_25_11 | 11934 | 12827 | - | 3.A.1.1.34 |
| TC | HRGMv2_2073_25 | HRGMv2_2073_25_12 | 12890 | 13996 | - | 3.A.1.1.38 |
| pfam | HRGMv2_2073_25 | HRGMv2_2073_25_13 | 14026 | 14775 | - | FRG |
| CAZyme | HRGMv2_2073_25 | HRGMv2_2073_25_14 | 14972 | 16510 | + | GH13_44 |
Gene ID: HRGMv2_2073_25_10
Type: TC
Location: 11038 - 11916 (-)
Type: TC
Location: 11038 - 11916 (-)
Gene ID: HRGMv2_2073_25_11
Type: TC
Location: 11934 - 12827 (-)
Type: TC
Location: 11934 - 12827 (-)
Gene ID: HRGMv2_2073_25_12
Type: TC
Location: 12890 - 13996 (-)
Type: TC
Location: 12890 - 13996 (-)
Gene ID: HRGMv2_2073_25_13
Type: pfam
Location: 14026 - 14775 (-)
Type: pfam
Location: 14026 - 14775 (-)
Gene ID: HRGMv2_2073_25_14
Type: CAZyme
Location: 14972 - 16510 (+)
Type: CAZyme
Location: 14972 - 16510 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Acetatifactor
Species
Acetatifactor intestinalis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.