Cluster: HRGMv2_2073_CGC24
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2073
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2073_22 | HRGMv2_2073_22_33 | 45262 | 46929 | - | 9.B.34.1.3 |
| NULL(UNKNOWN) | HRGMv2_2073_22 | HRGMv2_2073_22_34 | 47052 | 48017 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | HRGMv2_2073_22 | HRGMv2_2073_22_35 | 48256 | 48924 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2073_22 | HRGMv2_2073_22_36 | 49138 | 50487 | - | 1.A.26.1.2 |
| pfam | HRGMv2_2073_22 | HRGMv2_2073_22_37 | 50642 | 51289 | - | UPF0029 | DUF1949 |
| CAZyme | HRGMv2_2073_22 | HRGMv2_2073_22_38 | 51632 | 54301 | + | GT51 |
Gene ID: HRGMv2_2073_22_33
Type: TC
Location: 45262 - 46929 (-)
Type: TC
Location: 45262 - 46929 (-)
Gene ID: HRGMv2_2073_22_34
Type:
Location: 47052 - 48017 (-)
Type:
Location: 47052 - 48017 (-)
Gene ID: HRGMv2_2073_22_35
Type:
Location: 48256 - 48924 (-)
Type:
Location: 48256 - 48924 (-)
Gene ID: HRGMv2_2073_22_36
Type: TC
Location: 49138 - 50487 (-)
Type: TC
Location: 49138 - 50487 (-)
Gene ID: HRGMv2_2073_22_37
Type: pfam
Location: 50642 - 51289 (-)
Type: pfam
Location: 50642 - 51289 (-)
Gene ID: HRGMv2_2073_22_38
Type: CAZyme
Location: 51632 - 54301 (+)
Type: CAZyme
Location: 51632 - 54301 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Acetatifactor
Species
Acetatifactor intestinalis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.