Cluster: HRGMv2_2073_CGC23
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2073
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2073_22 | HRGMv2_2073_22_21 | 31580 | 32335 | - | 3.A.15.2.1 |
| pfam | HRGMv2_2073_22 | HRGMv2_2073_22_22 | 32355 | 32783 | - | N_methyl |
| TC | HRGMv2_2073_22 | HRGMv2_2073_22_23 | 32891 | 34105 | - | 3.A.15.2.1 |
| TC | HRGMv2_2073_22 | HRGMv2_2073_22_24 | 34249 | 35940 | - | 3.A.15.4.1 |
| NULL(UNKNOWN) | HRGMv2_2073_22 | HRGMv2_2073_22_25 | 36101 | 36580 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_2073_22 | HRGMv2_2073_22_26 | 36844 | 37833 | - | GH26 |
Gene ID: HRGMv2_2073_22_21
Type: TC
Location: 31580 - 32335 (-)
Type: TC
Location: 31580 - 32335 (-)
Gene ID: HRGMv2_2073_22_22
Type: pfam
Location: 32355 - 32783 (-)
Type: pfam
Location: 32355 - 32783 (-)
Gene ID: HRGMv2_2073_22_23
Type: TC
Location: 32891 - 34105 (-)
Type: TC
Location: 32891 - 34105 (-)
Gene ID: HRGMv2_2073_22_24
Type: TC
Location: 34249 - 35940 (-)
Type: TC
Location: 34249 - 35940 (-)
Gene ID: HRGMv2_2073_22_25
Type:
Location: 36101 - 36580 (-)
Type:
Location: 36101 - 36580 (-)
Gene ID: HRGMv2_2073_22_26
Type: CAZyme
Location: 36844 - 37833 (-)
Type: CAZyme
Location: 36844 - 37833 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Acetatifactor
Species
Acetatifactor intestinalis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2073_22_25 | vegetarian > vegan | 1.66998 | 0.00566 |