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Cluster: HRGMv2_2073_CGC22

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2073_19 HRGMv2_2073_19_43 44715 45791 + GT28
pfam HRGMv2_2073_19 HRGMv2_2073_19_44 45804 46658 - RrnaAD
pfam HRGMv2_2073_19 HRGMv2_2073_19_45 46699 47817 - DHHW | ALGX
TC HRGMv2_2073_19 HRGMv2_2073_19_46 47838 49253 - 2.A.50.2.1
pfam HRGMv2_2073_19 HRGMv2_2073_19_47 49270 49920 - DUF4358
TC HRGMv2_2073_19 HRGMv2_2073_19_48 50149 51702 + 3.A.1.121.4
TC HRGMv2_2073_19 HRGMv2_2073_19_49 51720 52466 + 9.B.158.1.1
pfam HRGMv2_2073_19 HRGMv2_2073_19_50 52456 53232 - Hydrolase | S6PP | Hydrolase_3
pfam HRGMv2_2073_19 HRGMv2_2073_19_51 53253 53723 - Acetyltransf_1 | Acetyltransf_7 | Acetyltransf_10
CAZyme HRGMv2_2073_19 HRGMv2_2073_19_52 53855 54877 - GH5_37
Gene ID: HRGMv2_2073_19_43
Type: CAZyme
Location: 44715 - 45791 (+)
Gene ID: HRGMv2_2073_19_44
Type: pfam
Location: 45804 - 46658 (-)
Gene ID: HRGMv2_2073_19_45
Type: pfam
Location: 46699 - 47817 (-)
Gene ID: HRGMv2_2073_19_46
Type: TC
Location: 47838 - 49253 (-)
Gene ID: HRGMv2_2073_19_47
Type: pfam
Location: 49270 - 49920 (-)
Gene ID: HRGMv2_2073_19_48
Type: TC
Location: 50149 - 51702 (+)
Gene ID: HRGMv2_2073_19_49
Type: TC
Location: 51720 - 52466 (+)
Gene ID: HRGMv2_2073_19_50
Type: pfam
Location: 52456 - 53232 (-)
Gene ID: HRGMv2_2073_19_51
Type: pfam
Location: 53253 - 53723 (-)
Gene ID: HRGMv2_2073_19_52
Type: CAZyme
Location: 53855 - 54877 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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