Cluster: HRGMv2_2073_CGC21
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2073
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2073_19 | HRGMv2_2073_19_22 | 23868 | 26993 | - | GH106 |
| CAZyme | HRGMv2_2073_19 | HRGMv2_2073_19_23 | 26996 | 28060 | - | GH33 |
| STP | HRGMv2_2073_19 | HRGMv2_2073_19_24 | 28149 | 29831 | - | SBP_bac_1 |
| TC | HRGMv2_2073_19 | HRGMv2_2073_19_25 | 29880 | 30767 | - | 3.A.1.1.10 |
| TC | HRGMv2_2073_19 | HRGMv2_2073_19_26 | 30778 | 31683 | - | 3.A.1.1.10 |
Gene ID: HRGMv2_2073_19_22
Type: CAZyme
Location: 23868 - 26993 (-)
Type: CAZyme
Location: 23868 - 26993 (-)
Gene ID: HRGMv2_2073_19_23
Type: CAZyme
Location: 26996 - 28060 (-)
Type: CAZyme
Location: 26996 - 28060 (-)
Gene ID: HRGMv2_2073_19_24
Type: STP
Location: 28149 - 29831 (-)
Type: STP
Location: 28149 - 29831 (-)
Gene ID: HRGMv2_2073_19_25
Type: TC
Location: 29880 - 30767 (-)
Type: TC
Location: 29880 - 30767 (-)
Gene ID: HRGMv2_2073_19_26
Type: TC
Location: 30778 - 31683 (-)
Type: TC
Location: 30778 - 31683 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Acetatifactor
Species
Acetatifactor intestinalis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.