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Cluster: HRGMv2_2073_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2073_15 HRGMv2_2073_15_30 37005 39440 - GH94
TF HRGMv2_2073_15 HRGMv2_2073_15_31 39933 40955 + LacI
NULL(UNKNOWN) HRGMv2_2073_15 HRGMv2_2073_15_32 41055 42464 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2073_15 HRGMv2_2073_15_33 42698 43612 + 3.A.1.1.4
TC HRGMv2_2073_15 HRGMv2_2073_15_34 43625 44491 + 3.A.1.1.48
NULL(UNKNOWN) HRGMv2_2073_15 HRGMv2_2073_15_35 44644 44805 + NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_2073_15 HRGMv2_2073_15_36 44826 45065 + zf-like
TC HRGMv2_2073_15 HRGMv2_2073_15_37 45549 45773 + 3.D.1.6.4
Gene ID: HRGMv2_2073_15_30
Type: CAZyme
Location: 37005 - 39440 (-)
Gene ID: HRGMv2_2073_15_31
Type: TF
Location: 39933 - 40955 (+)
Gene ID: HRGMv2_2073_15_32
Type:
Location: 41055 - 42464 (+)
Gene ID: HRGMv2_2073_15_33
Type: TC
Location: 42698 - 43612 (+)
Gene ID: HRGMv2_2073_15_34
Type: TC
Location: 43625 - 44491 (+)
Gene ID: HRGMv2_2073_15_35
Type:
Location: 44644 - 44805 (+)
Gene ID: HRGMv2_2073_15_36
Type: pfam
Location: 44826 - 45065 (+)
Gene ID: HRGMv2_2073_15_37
Type: TC
Location: 45549 - 45773 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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