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Cluster: HRGMv2_2073_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2073_15 HRGMv2_2073_15_18 22441 24075 + 9.B.142.3.8
pfam HRGMv2_2073_15 HRGMv2_2073_15_19 24058 24570 - dCMP_cyt_deam_1 | MafB19-deam
TF HRGMv2_2073_15 HRGMv2_2073_15_20 24797 25786 + LacI
CAZyme HRGMv2_2073_15 HRGMv2_2073_15_21 25982 28264 + GT35
TC HRGMv2_2073_15 HRGMv2_2073_15_22 29229 30632 + 3.A.1.1.45
TC HRGMv2_2073_15 HRGMv2_2073_15_23 30740 31582 + 3.A.1.1.45
TC HRGMv2_2073_15 HRGMv2_2073_15_24 31582 32421 + 3.A.1.1.45
CAZyme HRGMv2_2073_15 HRGMv2_2073_15_25 32452 33945 + GH77
Gene ID: HRGMv2_2073_15_18
Type: TC
Location: 22441 - 24075 (+)
Gene ID: HRGMv2_2073_15_19
Type: pfam
Location: 24058 - 24570 (-)
Gene ID: HRGMv2_2073_15_20
Type: TF
Location: 24797 - 25786 (+)
Gene ID: HRGMv2_2073_15_21
Type: CAZyme
Location: 25982 - 28264 (+)
Gene ID: HRGMv2_2073_15_22
Type: TC
Location: 29229 - 30632 (+)
Gene ID: HRGMv2_2073_15_23
Type: TC
Location: 30740 - 31582 (+)
Gene ID: HRGMv2_2073_15_24
Type: TC
Location: 31582 - 32421 (+)
Gene ID: HRGMv2_2073_15_25
Type: CAZyme
Location: 32452 - 33945 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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