Cluster: HRGMv2_2073_CGC12
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2073
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2073_13 | HRGMv2_2073_13_47 | 44245 | 45360 | - | 9.A.47.2.1 |
| STP | HRGMv2_2073_13 | HRGMv2_2073_13_48 | 45636 | 47039 | - | EAL | GGDEF |
| NULL(UNKNOWN) | HRGMv2_2073_13 | HRGMv2_2073_13_49 | 47198 | 47311 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2073_13 | HRGMv2_2073_13_50 | 47331 | 49160 | - | 3.A.1.120.6 |
| CAZyme | HRGMv2_2073_13 | HRGMv2_2073_13_51 | 49304 | 51292 | + | GH2 |
| TC | HRGMv2_2073_13 | HRGMv2_2073_13_52 | 51213 | 52577 | - | 2.A.66.1.33 |
Gene ID: HRGMv2_2073_13_47
Type: TC
Location: 44245 - 45360 (-)
Type: TC
Location: 44245 - 45360 (-)
Gene ID: HRGMv2_2073_13_48
Type: STP
Location: 45636 - 47039 (-)
Type: STP
Location: 45636 - 47039 (-)
Gene ID: HRGMv2_2073_13_49
Type:
Location: 47198 - 47311 (+)
Type:
Location: 47198 - 47311 (+)
Gene ID: HRGMv2_2073_13_50
Type: TC
Location: 47331 - 49160 (-)
Type: TC
Location: 47331 - 49160 (-)
Gene ID: HRGMv2_2073_13_51
Type: CAZyme
Location: 49304 - 51292 (+)
Type: CAZyme
Location: 49304 - 51292 (+)
Gene ID: HRGMv2_2073_13_52
Type: TC
Location: 51213 - 52577 (-)
Type: TC
Location: 51213 - 52577 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Acetatifactor
Species
Acetatifactor intestinalis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.