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Cluster: HRGMv2_2073_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2073_1 HRGMv2_2073_1_5 6014 7063 - 3.A.1.11.1
TC HRGMv2_2073_1 HRGMv2_2073_1_6 7060 7872 - 3.A.1.11.1
TC HRGMv2_2073_1 HRGMv2_2073_1_7 7875 8750 - 3.A.1.11.1
TC HRGMv2_2073_1 HRGMv2_2073_1_8 8728 9720 - 3.A.1.11.1
pfam HRGMv2_2073_1 HRGMv2_2073_1_9 9788 10903 - DUF6056
CAZyme HRGMv2_2073_1 HRGMv2_2073_1_10 11017 12324 - GH136
NULL(UNKNOWN) HRGMv2_2073_1 HRGMv2_2073_1_11 12275 12748 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2073_1 HRGMv2_2073_1_12 12748 13554 - 3.A.1.1.4
TC HRGMv2_2073_1 HRGMv2_2073_1_13 13547 14425 - 3.A.1.1.4
TC HRGMv2_2073_1 HRGMv2_2073_1_14 14499 15854 - 3.A.1.1.4
CAZyme HRGMv2_2073_1 HRGMv2_2073_1_15 15925 18084 - GH112
Gene ID: HRGMv2_2073_1_5
Type: TC
Location: 6014 - 7063 (-)
Gene ID: HRGMv2_2073_1_6
Type: TC
Location: 7060 - 7872 (-)
Gene ID: HRGMv2_2073_1_7
Type: TC
Location: 7875 - 8750 (-)
Gene ID: HRGMv2_2073_1_8
Type: TC
Location: 8728 - 9720 (-)
Gene ID: HRGMv2_2073_1_9
Type: pfam
Location: 9788 - 10903 (-)
Gene ID: HRGMv2_2073_1_10
Type: CAZyme
Location: 11017 - 12324 (-)
Gene ID: HRGMv2_2073_1_11
Type:
Location: 12275 - 12748 (-)
Gene ID: HRGMv2_2073_1_12
Type: TC
Location: 12748 - 13554 (-)
Gene ID: HRGMv2_2073_1_13
Type: TC
Location: 13547 - 14425 (-)
Gene ID: HRGMv2_2073_1_14
Type: TC
Location: 14499 - 15854 (-)
Gene ID: HRGMv2_2073_1_15
Type: CAZyme
Location: 15925 - 18084 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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