dbCAN Logo

Cluster: HRGMv2_2064_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2064_3 HRGMv2_2064_3_62 68300 69697 + 2.A.66.1.32
pfam HRGMv2_2064_3 HRGMv2_2064_3_63 69797 70789 - Fic | Fic-like_C
pfam HRGMv2_2064_3 HRGMv2_2064_3_64 71045 71800 + Exo_endo_phos
CAZyme HRGMv2_2064_3 HRGMv2_2064_3_65 71819 74065 - GH31_1
pfam HRGMv2_2064_3 HRGMv2_2064_3_66 74151 74807 - Hexapep | Mac | Hexapep_2 | Hexapep_2
CAZyme HRGMv2_2064_3 HRGMv2_2064_3_67 74957 77350 - GH31_15
TC HRGMv2_2064_3 HRGMv2_2064_3_68 77378 78199 - 3.A.1.1.34
TC HRGMv2_2064_3 HRGMv2_2064_3_69 78212 79090 - 3.A.1.1.11
Gene ID: HRGMv2_2064_3_62
Type: TC
Location: 68300 - 69697 (+)
Gene ID: HRGMv2_2064_3_63
Type: pfam
Location: 69797 - 70789 (-)
Gene ID: HRGMv2_2064_3_64
Type: pfam
Location: 71045 - 71800 (+)
Gene ID: HRGMv2_2064_3_65
Type: CAZyme
Location: 71819 - 74065 (-)
Gene ID: HRGMv2_2064_3_66
Type: pfam
Location: 74151 - 74807 (-)
Gene ID: HRGMv2_2064_3_67
Type: CAZyme
Location: 74957 - 77350 (-)
Gene ID: HRGMv2_2064_3_68
Type: TC
Location: 77378 - 78199 (-)
Gene ID: HRGMv2_2064_3_69
Type: TC
Location: 78212 - 79090 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_2064_3_63 vegan > omnivore 1.75574 0.01057
HRGMv2_2064_3_63 vegetarian > omnivore 1.71479 0.00863
HRGMv2_2064_3_64 vegetarian > vegan 1.37361 0.00603

🧭 Explore Read Mapping of CGC

← Back to Cluster List