Cluster: HRGMv2_2064_CGC29
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2064
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2064_20 | HRGMv2_2064_20_33 | 39153 | 39767 | + | 9.B.104.1.3 |
| pfam | HRGMv2_2064_20 | HRGMv2_2064_20_34 | 39791 | 40780 | + | SCP2 |
| pfam | HRGMv2_2064_20 | HRGMv2_2064_20_35 | 40848 | 41264 | + | HIT | DcpS_C |
| CAZyme | HRGMv2_2064_20 | HRGMv2_2064_20_36 | 41426 | 42502 | - | GT28 |
Gene ID: HRGMv2_2064_20_33
Type: TC
Location: 39153 - 39767 (+)
Type: TC
Location: 39153 - 39767 (+)
Gene ID: HRGMv2_2064_20_34
Type: pfam
Location: 39791 - 40780 (+)
Type: pfam
Location: 39791 - 40780 (+)
Gene ID: HRGMv2_2064_20_35
Type: pfam
Location: 40848 - 41264 (+)
Type: pfam
Location: 40848 - 41264 (+)
Gene ID: HRGMv2_2064_20_36
Type: CAZyme
Location: 41426 - 42502 (-)
Type: CAZyme
Location: 41426 - 42502 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Species
Agathobacter sp900546625
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.