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Cluster: HRGMv2_2064_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2064_5 HRGMv2_2064_5_112 119777 121291 + 4.C.1.1.4
CAZyme HRGMv2_2064_5 HRGMv2_2064_5_113 121628 122641 + GT2
pfam HRGMv2_2064_5 HRGMv2_2064_5_114 122755 123675 - NadA
TC HRGMv2_2064_5 HRGMv2_2064_5_115 123956 125296 + 3.D.10.1.4
pfam HRGMv2_2064_5 HRGMv2_2064_5_116 125586 126440 + QRPTase_C | QRPTase_N
TF HRGMv2_2064_5 HRGMv2_2064_5_117 126501 127064 + HTH_11
TC HRGMv2_2064_5 HRGMv2_2064_5_118 127184 128692 + 1.B.52.2.1
NULL(UNKNOWN) HRGMv2_2064_5 HRGMv2_2064_5_119 128843 129775 + NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_2064_5 HRGMv2_2064_5_120 130180 133347 + tRNA-synt_1 | Anticodon_1 | tRNA-synt_1g | tRNA-synt_1g | DUF5915
CAZyme HRGMv2_2064_5 HRGMv2_2064_5_121 133406 135874 + GT35
Gene ID: HRGMv2_2064_5_112
Type: TC
Location: 119777 - 121291 (+)
Gene ID: HRGMv2_2064_5_113
Type: CAZyme
Location: 121628 - 122641 (+)
Gene ID: HRGMv2_2064_5_114
Type: pfam
Location: 122755 - 123675 (-)
Gene ID: HRGMv2_2064_5_115
Type: TC
Location: 123956 - 125296 (+)
Gene ID: HRGMv2_2064_5_116
Type: pfam
Location: 125586 - 126440 (+)
Gene ID: HRGMv2_2064_5_117
Type: TF
Location: 126501 - 127064 (+)
Gene ID: HRGMv2_2064_5_118
Type: TC
Location: 127184 - 128692 (+)
Gene ID: HRGMv2_2064_5_119
Type:
Location: 128843 - 129775 (+)
Gene ID: HRGMv2_2064_5_120
Type: pfam
Location: 130180 - 133347 (+)
Gene ID: HRGMv2_2064_5_121
Type: CAZyme
Location: 133406 - 135874 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_2064_5_120 vegan > omnivore 1.14382 0.01057

🧭 Explore Read Mapping of CGC

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