Cluster: HRGMv2_2054_CGC29
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2054
- CGC Family ID: CGCFAM_00546
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2054_42 | HRGMv2_2054_42_11 | 19834 | 20136 | + | GT2 |
| NULL(UNKNOWN) | HRGMv2_2054_42 | HRGMv2_2054_42_12 | 20097 | 20861 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | HRGMv2_2054_42 | HRGMv2_2054_42_13 | 20879 | 21439 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2054_42 | HRGMv2_2054_42_14 | 21429 | 22481 | + | 4.D.2.1.5 |
Gene ID: HRGMv2_2054_42_11
Type: CAZyme
Location: 19834 - 20136 (+)
Type: CAZyme
Location: 19834 - 20136 (+)
Gene ID: HRGMv2_2054_42_12
Type:
Location: 20097 - 20861 (+)
Type:
Location: 20097 - 20861 (+)
Gene ID: HRGMv2_2054_42_13
Type:
Location: 20879 - 21439 (+)
Type:
Location: 20879 - 21439 (+)
Gene ID: HRGMv2_2054_42_14
Type: TC
Location: 21429 - 22481 (+)
Type: TC
Location: 21429 - 22481 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Hominisplanchenecus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.