PROTEIN: HRGMv2_2054_42_12
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Protein File & Metadata
Source:
HRGMv2_2054_42_12.pdb
Genome ID:
Protein ID:
HRGMv2_2054_42_12
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Protein Sequence
MVDSDDWLDV EALKKLLTEI RKRKRQGDLT DLIICNYLYD HLYEGKQKRM GYENVFRDGE 60 VCTWDTIGKF RPSQYLVMHA QICRTEVLRR SGVHLPRHTF YVDNLFANQP LPFVKTILYL 120 DLNLYHYFLG REDQSVNEQV LMRMIDQQIL VTKMVSGCSN LKEVQKEHPK LADYLVRNLS 180 IMLSISSIHL LLIGTEEAME KRKELWEYMR RRGNGLYRKL RFGTVSGFTY LPGKAGAALT 240 LAGYRLAKRF YHFN 254
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q5FA27-F1-model_v4 | 1 | 251 | 94 | 327 | 0.65 |
0.807 |
| AF-A0A0H3GYS5-F1-model_v4 | 1 | 237 | 90 | 324 | 0.6371 |
0.7909 |
| AF-Q329N9-F1-model_v4 | 1 | 237 | 91 | 326 | 0.6335 |
0.7879 |
| AF-P11290-F1-model_v4 | 1 | 238 | 91 | 327 | 0.6271 |
0.7854 |
| AF-Q8ZL53-F1-model_v4 | 1 | 237 | 91 | 326 | 0.6251 |
0.7864 |
| AF-A0A0H3GV76-F1-model_v4 | 1 | 251 | 94 | 338 | 0.5672 |
0.7534 |
| AF-Q0P9B5-F1-model_v4 | 1 | 227 | 88 | 290 | 0.5471 |
0.7437 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A7I8DK06-F1-model_v4 | GT2 | 1 | 254 | 63 | 314 | 0.832 |
0.938 |
| AF-D4KRM7-F1-model_v4 | GT2 | 1 | 254 | 91 | 348 | 0.8305 |
0.9668 |
| AF-D4KWT6-F1-model_v4 | GT2 | 1 | 254 | 91 | 348 | 0.8303 |
0.9667 |
| AF-A0A0S2W6X0-F1-model_v4 | GT2 | 1 | 254 | 87 | 340 | 0.8296 |
0.9578 |
| AF-V2YF67-F1-model_v4 | GT2 | 1 | 254 | 89 | 342 | 0.8288 |
0.9591 |
| AF-H6LDW0-F1-model_v4 | GT2 | 1 | 254 | 87 | 346 | 0.8286 |
0.9631 |
| AF-A0A2Z4I7V7-F1-model_v4 | GT2 | 1 | 254 | 87 | 346 | 0.8271 |
0.9614 |
| AF-A0A174NE99-F1-model_v4 | GT2 | 1 | 254 | 89 | 342 | 0.8242 |
0.9541 |
| AF-A0A291TBM0-F1-model_v4 | GT2 | 1 | 254 | 90 | 342 | 0.8228 |
0.9556 |
| AF-A0A1C7FIK6-F1-model_v4 | GT2 | 1 | 254 | 89 | 342 | 0.8223 |
0.9521 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| D4KWT6 | GT2 | 1 | 254 | 91 | 348 | 0.8303 |
0.9667 |
| E3DM06 | GT2 | 1 | 254 | 87 | 340 | 0.8199 |
0.948 |
| A0A806K000 | GT2 | 1 | 254 | 72 | 321 | 0.8096 |
0.9298 |
| A0A1H8S5W1 | GT2 | 1 | 254 | 88 | 339 | 0.8007 |
0.9343 |
| A0A975XYB2 | GT2 | 1 | 254 | 98 | 349 | 0.7968 |
0.9392 |
| A0A0M6WGS7 | GT2 | 1 | 254 | 102 | 352 | 0.7935 |
0.9418 |
| A0A449BCU5 | GT2 | 1 | 254 | 87 | 342 | 0.7924 |
0.9199 |
| D6ZJV2 | GT2 | 1 | 254 | 107 | 359 | 0.7918 |
0.9403 |
| I4DB53 | GT2 | 1 | 254 | 92 | 340 | 0.7905 |
0.9326 |
| A0A6F8SKL8 | GT2 | 1 | 254 | 102 | 353 | 0.7867 |
0.9318 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P11290-F1-model_v4 | 1 | 238 | 91 | 327 | 0.6271 |
0.7854 |