Cluster: HRGMv2_2054_CGC15
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2054
- CGC Family ID: CGCFAM_00051
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2054_11 | HRGMv2_2054_11_12 | 12386 | 14122 | + | 8.A.59.2.1 |
| NULL(UNKNOWN) | HRGMv2_2054_11 | HRGMv2_2054_11_13 | 14133 | 15068 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2054_11 | HRGMv2_2054_11_14 | 15086 | 16126 | + | 3.A.1.2.3 |
| CAZyme | HRGMv2_2054_11 | HRGMv2_2054_11_15 | 16267 | 20913 | + | GH3 |
Gene ID: HRGMv2_2054_11_12
Type: TC
Location: 12386 - 14122 (+)
Type: TC
Location: 12386 - 14122 (+)
Gene ID: HRGMv2_2054_11_13
Type:
Location: 14133 - 15068 (+)
Type:
Location: 14133 - 15068 (+)
Gene ID: HRGMv2_2054_11_14
Type: TC
Location: 15086 - 16126 (+)
Type: TC
Location: 15086 - 16126 (+)
Gene ID: HRGMv2_2054_11_15
Type: CAZyme
Location: 16267 - 20913 (+)
Type: CAZyme
Location: 16267 - 20913 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Hominisplanchenecus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.