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PROTEIN: HRGMv2_2054_11_13

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Protein File & Metadata
Download PDB File
Source:
HRGMv2_2054_11_13.pdb
Genome ID:
HRGMv2_2054
Protein ID:
HRGMv2_2054_11_13

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Detailed structural information will appear here after analysis...

Protein Sequence 
MKKRNIILVS   VWFCLLLFLM   VASFTNLIFK   EDQERVYNIA   VVLDDDQKIE   YENFKAGITE 60
ALKGKSVKVY   YMNLFGTDRD   SIKEKLEKQC   RQRDMVVVRC   DANAILAELT   EQIDTRGKLF 120
CIQAKENPKG   SLCNLAADDR   QRGAQLGERI   LKEQGREKHI   YVFGSTYEKL   EQDESLVGLD 180
EQVKVTNCME   RSEEEIRNRI   AQIKASGEEA   VLVAMKLQTL   KDLVEIQVKE   NTRYPLYGFG 240
YDREILAFME   EGKIQAVNIV   PEYYMGYLAM   NQALDVIEKT   QKPKSQEMES   YTIGSEEIFS 300
EKYEDMLFPR   K 311
Protein Structure Viewer

Confidence Score (pLDDT)

Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-P77269-F1-model_v4 3 311 9 326 0.7695 0.8146
AF-A0A0H3GUC9-F1-model_v4 3 309 2 304 0.7575 0.7929
AF-A0A0H3GGS8-F1-model_v4 2 296 5 296 0.7527 0.8057
AF-P44737-F1-model_v4 2 295 3 292 0.7508 0.8024
AF-P02925-F1-model_v4 2 296 5 296 0.7499 0.8019
AF-P0A2C5-F1-model_v4 2 296 5 296 0.7493 0.8028
AF-P39325-F1-model_v4 3 311 3 318 0.7456 0.7832
AF-Q329G5-F1-model_v4 32 310 23 313 0.7422 0.844
AF-A0A0H3GM24-F1-model_v4 32 310 23 313 0.7418 0.8433
AF-A0A0H3GP52-F1-model_v4 18 309 11 307 0.7392 0.8045
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
QVQ50493.1 GH13_30 20 297 19 329 0.5126 0.7755
AF-A0A1H2L9Q7-F1-model_v4 CBM66 , GH32 32 309 701 1025 0.4833 0.8266
AF-A0A6V7BSM4-F1-model_v4 GH43_9 19 297 600 920 0.4727 0.7862
AGT25470.1 GH32 20 297 497 810 0.4673 0.7512
AF-A0A068NET1-F1-model_v4 GH32 33 296 58 331 0.4607 0.7821
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A0K2FCC7 GT4 33 297 56 337 0.6751 0.8371
QVQ50493.1 GH13_30 20 297 19 329 0.5126 0.7755
A0A1H2L9Q7 CBM66 , GH32 32 309 701 1025 0.4833 0.8266
A0A2N6UZS3 GH32 23 305 27 386 0.4749 0.7573
A0A6V7BSM4 GH43_9 19 297 600 920 0.4727 0.7862
AGT25470.1 GH32 20 297 497 810 0.4673 0.7512
A0A068NET1 GH32 33 296 58 331 0.4607 0.7821
ALJ95318.1 GH2 33 297 61 331 0.4181 0.7933
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
3g1w-assembly1.cif.gz_B 36 308 1 290 0.7826 0.8752
3g1w-assembly1.cif.gz_A 37 308 1 291 0.7778 0.873
6sw4-assembly1.cif.gz_A 35 309 1 290 0.7725 0.8598
4kq9-assembly1.cif.gz_A 33 309 4 298 0.77 0.8641
4rwe-assembly1.cif.gz_A 35 309 1 287 0.7559 0.8385
3o1i-assembly1.cif.gz_C 36 311 1 295 0.7556 0.8503
5hsg-assembly1.cif.gz_A 36 310 1 284 0.7548 0.8363
6gq0-assembly1.cif.gz_A 33 304 1 280 0.7545 0.8366
3o1h-assembly1.cif.gz_B 36 311 1 291 0.7514 0.8432
5dkv-assembly4.cif.gz_D 36 311 1 298 0.7499 0.8456
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-P77269-F1-model_v4 3 311 9 326 0.7695 0.8146
AF-P44737-F1-model_v4 2 295 3 292 0.7508 0.8024
AF-P02925-F1-model_v4 2 296 5 296 0.7499 0.8019
AF-P55568-F1-model_v4 1 311 7 324 0.7498 0.7901
AF-P0A2C5-F1-model_v4 2 296 5 296 0.7493 0.8028
AF-P0A2C6-F1-model_v4 2 297 5 296 0.7475 0.7997
AF-P39325-F1-model_v4 3 311 3 318 0.7456 0.7832
AF-P49308-F1-model_v4 14 307 6 309 0.7398 0.8022
AF-P54082-F1-model_v4 1 310 5 350 0.7274 0.7976
AF-P44883-F1-model_v4 2 305 3 331 0.7273 0.7895
Download Full SwissProt Results