Cluster: HRGMv2_2046_CGC57
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2046
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2046_58 | HRGMv2_2046_58_10 | 10589 | 11488 | + | 3.A.1.1.11 |
| TC | HRGMv2_2046_58 | HRGMv2_2046_58_11 | 11490 | 12341 | + | 3.A.1.1.11 |
| CAZyme | HRGMv2_2046_58 | HRGMv2_2046_58_12 | 12358 | 14238 | + | GH127 |
| TC | HRGMv2_2046_58 | HRGMv2_2046_58_13 | 14241 | 16064 | - | 8.A.59.2.1 |
Gene ID: HRGMv2_2046_58_10
Type: TC
Location: 10589 - 11488 (+)
Type: TC
Location: 10589 - 11488 (+)
Gene ID: HRGMv2_2046_58_11
Type: TC
Location: 11490 - 12341 (+)
Type: TC
Location: 11490 - 12341 (+)
Gene ID: HRGMv2_2046_58_12
Type: CAZyme
Location: 12358 - 14238 (+)
Type: CAZyme
Location: 12358 - 14238 (+)
Gene ID: HRGMv2_2046_58_13
Type: TC
Location: 14241 - 16064 (-)
Type: TC
Location: 14241 - 16064 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Limivivens
Species
Limivivens faecihominis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.