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Cluster: HRGMv2_2046_CGC54

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2046_52 HRGMv2_2046_52_2 555 2300 + 3.A.1.106.8
TC HRGMv2_2046_52 HRGMv2_2046_52_3 2297 3928 + 3.A.1.135.9
TF HRGMv2_2046_52 HRGMv2_2046_52_4 3925 5301 - HTH_AraC | HTH_AraC
TC HRGMv2_2046_52 HRGMv2_2046_52_5 5279 6988 - 9.B.33.1.1
STP HRGMv2_2046_52 HRGMv2_2046_52_6 7214 8875 + SBP_bac_1
TC HRGMv2_2046_52 HRGMv2_2046_52_7 8942 9844 + 3.A.1.1.9
TC HRGMv2_2046_52 HRGMv2_2046_52_8 9857 10741 + 3.A.1.1.9
CAZyme HRGMv2_2046_52 HRGMv2_2046_52_9 10745 12568 + PL27
CAZyme HRGMv2_2046_52 HRGMv2_2046_52_10 12587 14587 + GH42
Gene ID: HRGMv2_2046_52_2
Type: TC
Location: 555 - 2300 (+)
Gene ID: HRGMv2_2046_52_3
Type: TC
Location: 2297 - 3928 (+)
Gene ID: HRGMv2_2046_52_4
Type: TF
Location: 3925 - 5301 (-)
Gene ID: HRGMv2_2046_52_5
Type: TC
Location: 5279 - 6988 (-)
Gene ID: HRGMv2_2046_52_6
Type: STP
Location: 7214 - 8875 (+)
Gene ID: HRGMv2_2046_52_7
Type: TC
Location: 8942 - 9844 (+)
Gene ID: HRGMv2_2046_52_8
Type: TC
Location: 9857 - 10741 (+)
Gene ID: HRGMv2_2046_52_9
Type: CAZyme
Location: 10745 - 12568 (+)
Gene ID: HRGMv2_2046_52_10
Type: CAZyme
Location: 12587 - 14587 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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