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Cluster: HRGMv2_2046_CGC50

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2046_47 HRGMv2_2046_47_11 11334 13553 + GH36
TC HRGMv2_2046_47 HRGMv2_2046_47_12 13621 15258 + 3.A.1.5.1
TC HRGMv2_2046_47 HRGMv2_2046_47_13 15452 16408 + 3.A.1.5.2
TC HRGMv2_2046_47 HRGMv2_2046_47_14 16425 17354 + 3.A.1.5.2
TC HRGMv2_2046_47 HRGMv2_2046_47_15 17375 18406 + 3.A.1.5.19
TC HRGMv2_2046_47 HRGMv2_2046_47_16 18396 19361 + 3.A.1.5.19
TC HRGMv2_2046_47 HRGMv2_2046_47_17 19434 21356 - 3.A.1.121.4
Gene ID: HRGMv2_2046_47_11
Type: CAZyme
Location: 11334 - 13553 (+)
Gene ID: HRGMv2_2046_47_12
Type: TC
Location: 13621 - 15258 (+)
Gene ID: HRGMv2_2046_47_13
Type: TC
Location: 15452 - 16408 (+)
Gene ID: HRGMv2_2046_47_14
Type: TC
Location: 16425 - 17354 (+)
Gene ID: HRGMv2_2046_47_15
Type: TC
Location: 17375 - 18406 (+)
Gene ID: HRGMv2_2046_47_16
Type: TC
Location: 18396 - 19361 (+)
Gene ID: HRGMv2_2046_47_17
Type: TC
Location: 19434 - 21356 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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