Cluster: HRGMv2_2046_CGC49
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2046
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2046_45 | HRGMv2_2046_45_2 | 867 | 2219 | + | 2.A.66.1.13 |
| pfam | HRGMv2_2046_45 | HRGMv2_2046_45_3 | 2417 | 3406 | + | 2-Hacid_dh | 2-Hacid_dh_C |
| CAZyme | HRGMv2_2046_45 | HRGMv2_2046_45_4 | 3625 | 4602 | + | GH109 |
Gene ID: HRGMv2_2046_45_2
Type: TC
Location: 867 - 2219 (+)
Type: TC
Location: 867 - 2219 (+)
Gene ID: HRGMv2_2046_45_3
Type: pfam
Location: 2417 - 3406 (+)
Type: pfam
Location: 2417 - 3406 (+)
Gene ID: HRGMv2_2046_45_4
Type: CAZyme
Location: 3625 - 4602 (+)
Type: CAZyme
Location: 3625 - 4602 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Limivivens
Species
Limivivens faecihominis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.