Cluster: HRGMv2_2046_CGC48
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2046
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2046_40 | HRGMv2_2046_40_22 | 19636 | 22047 | - | GH31_15 |
| pfam | HRGMv2_2046_40 | HRGMv2_2046_40_23 | 22209 | 22730 | + | Pro_isomerase |
| TC | HRGMv2_2046_40 | HRGMv2_2046_40_24 | 22804 | 23721 | - | 8.A.5.1.7 |
| TC | HRGMv2_2046_40 | HRGMv2_2046_40_25 | 23740 | 25368 | - | 8.A.7.1.1 |
Gene ID: HRGMv2_2046_40_22
Type: CAZyme
Location: 19636 - 22047 (-)
Type: CAZyme
Location: 19636 - 22047 (-)
Gene ID: HRGMv2_2046_40_23
Type: pfam
Location: 22209 - 22730 (+)
Type: pfam
Location: 22209 - 22730 (+)
Gene ID: HRGMv2_2046_40_24
Type: TC
Location: 22804 - 23721 (-)
Type: TC
Location: 22804 - 23721 (-)
Gene ID: HRGMv2_2046_40_25
Type: TC
Location: 23740 - 25368 (-)
Type: TC
Location: 23740 - 25368 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Limivivens
Species
Limivivens faecihominis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.