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Cluster: HRGMv2_2046_CGC46

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2046_39 HRGMv2_2046_39_8 7270 8583 + GH29
CAZyme HRGMv2_2046_39 HRGMv2_2046_39_9 8666 9967 + GH29
TC HRGMv2_2046_39 HRGMv2_2046_39_10 9988 10932 + 3.A.1.1.10
TC HRGMv2_2046_39 HRGMv2_2046_39_11 10945 11844 + 3.A.1.1.29
TC HRGMv2_2046_39 HRGMv2_2046_39_12 11874 13475 + 3.A.1.1.10
CAZyme HRGMv2_2046_39 HRGMv2_2046_39_13 13605 14987 + GH29
CAZyme HRGMv2_2046_39 HRGMv2_2046_39_14 15001 16800 + GH43_22 | GH43_34
TC HRGMv2_2046_39 HRGMv2_2046_39_15 16962 17741 + 2.A.5.5.2
TC HRGMv2_2046_39 HRGMv2_2046_39_16 17800 19215 - 2.A.40.2.1
Gene ID: HRGMv2_2046_39_8
Type: CAZyme
Location: 7270 - 8583 (+)
Gene ID: HRGMv2_2046_39_9
Type: CAZyme
Location: 8666 - 9967 (+)
Gene ID: HRGMv2_2046_39_10
Type: TC
Location: 9988 - 10932 (+)
Gene ID: HRGMv2_2046_39_11
Type: TC
Location: 10945 - 11844 (+)
Gene ID: HRGMv2_2046_39_12
Type: TC
Location: 11874 - 13475 (+)
Gene ID: HRGMv2_2046_39_13
Type: CAZyme
Location: 13605 - 14987 (+)
Gene ID: HRGMv2_2046_39_14
Type: CAZyme
Location: 15001 - 16800 (+)
Gene ID: HRGMv2_2046_39_15
Type: TC
Location: 16962 - 17741 (+)
Gene ID: HRGMv2_2046_39_16
Type: TC
Location: 17800 - 19215 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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