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Cluster: HRGMv2_2046_CGC44

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2046_33 HRGMv2_2046_33_21 21448 23292 - 3.A.16.1.2
sulfatase HRGMv2_2046_33 HRGMv2_2046_33_22 23472 25490 - S1_4
CAZyme HRGMv2_2046_33 HRGMv2_2046_33_23 25710 27524 - GH2
pfam HRGMv2_2046_33 HRGMv2_2046_33_24 27563 28519 - Acyl_transf_3 | HGSNAT_cat
TC HRGMv2_2046_33 HRGMv2_2046_33_25 28563 29390 - 3.A.1.1.36
TC HRGMv2_2046_33 HRGMv2_2046_33_26 29390 30280 - 3.A.1.1.36
TC HRGMv2_2046_33 HRGMv2_2046_33_27 30382 31707 - 3.A.1.1.36
TF HRGMv2_2046_33 HRGMv2_2046_33_28 32253 33173 - HTH_5
TC HRGMv2_2046_33 HRGMv2_2046_33_29 33453 34808 + 2.A.66.1.33
TC HRGMv2_2046_33 HRGMv2_2046_33_30 35465 36868 + 2.A.86.1.8
Gene ID: HRGMv2_2046_33_21
Type: TC
Location: 21448 - 23292 (-)
Gene ID: HRGMv2_2046_33_22
Type: sulfatase
Location: 23472 - 25490 (-)
Gene ID: HRGMv2_2046_33_23
Type: CAZyme
Location: 25710 - 27524 (-)
Gene ID: HRGMv2_2046_33_24
Type: pfam
Location: 27563 - 28519 (-)
Gene ID: HRGMv2_2046_33_25
Type: TC
Location: 28563 - 29390 (-)
Gene ID: HRGMv2_2046_33_26
Type: TC
Location: 29390 - 30280 (-)
Gene ID: HRGMv2_2046_33_27
Type: TC
Location: 30382 - 31707 (-)
Gene ID: HRGMv2_2046_33_28
Type: TF
Location: 32253 - 33173 (-)
Gene ID: HRGMv2_2046_33_29
Type: TC
Location: 33453 - 34808 (+)
Gene ID: HRGMv2_2046_33_30
Type: TC
Location: 35465 - 36868 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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