Cluster: HRGMv2_2046_CGC4
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_2046
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2046_1 | HRGMv2_2046_1_120 | 126505 | 127032 | + | 9.B.156.3.1 |
| NULL(UNKNOWN) | HRGMv2_2046_1 | HRGMv2_2046_1_121 | 127404 | 127529 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_2046_1 | HRGMv2_2046_1_122 | 127855 | 129522 | + | GH13_31 |
| peptidase | HRGMv2_2046_1 | HRGMv2_2046_1_123 | 129503 | 130612 | + | S66.UPW |
| CAZyme | HRGMv2_2046_1 | HRGMv2_2046_1_124 | 130760 | 133138 | + | GH2 |
| CAZyme | HRGMv2_2046_1 | HRGMv2_2046_1_125 | 133246 | 134937 | + | GH5_46 |
Gene ID: HRGMv2_2046_1_120
Type: TC
Location: 126505 - 127032 (+)
Type: TC
Location: 126505 - 127032 (+)
Gene ID: HRGMv2_2046_1_121
Type:
Location: 127404 - 127529 (+)
Type:
Location: 127404 - 127529 (+)
Gene ID: HRGMv2_2046_1_122
Type: CAZyme
Location: 127855 - 129522 (+)
Type: CAZyme
Location: 127855 - 129522 (+)
Gene ID: HRGMv2_2046_1_123
Type: peptidase
Location: 129503 - 130612 (+)
Type: peptidase
Location: 129503 - 130612 (+)
Gene ID: HRGMv2_2046_1_124
Type: CAZyme
Location: 130760 - 133138 (+)
Type: CAZyme
Location: 130760 - 133138 (+)
Gene ID: HRGMv2_2046_1_125
Type: CAZyme
Location: 133246 - 134937 (+)
Type: CAZyme
Location: 133246 - 134937 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Limivivens
Species
Limivivens faecihominis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.