Cluster: HRGMv2_2046_CGC36
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2046
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2046_23 | HRGMv2_2046_23_30 | 29721 | 30590 | + | 3.A.1.8.1 |
| TC | HRGMv2_2046_23 | HRGMv2_2046_23_31 | 30587 | 31273 | + | 3.A.1.8.1 |
| TC | HRGMv2_2046_23 | HRGMv2_2046_23_32 | 31270 | 32316 | + | 3.A.1.10.4 |
| CAZyme | HRGMv2_2046_23 | HRGMv2_2046_23_33 | 32335 | 34668 | + | CBM67 | GH78 |
Gene ID: HRGMv2_2046_23_30
Type: TC
Location: 29721 - 30590 (+)
Type: TC
Location: 29721 - 30590 (+)
Gene ID: HRGMv2_2046_23_31
Type: TC
Location: 30587 - 31273 (+)
Type: TC
Location: 30587 - 31273 (+)
Gene ID: HRGMv2_2046_23_32
Type: TC
Location: 31270 - 32316 (+)
Type: TC
Location: 31270 - 32316 (+)
Gene ID: HRGMv2_2046_23_33
Type: CAZyme
Location: 32335 - 34668 (+)
Type: CAZyme
Location: 32335 - 34668 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Limivivens
Species
Limivivens faecihominis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.