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Cluster: HRGMv2_2046_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2046_9 HRGMv2_2046_9_62 65205 67796 - CBM67 | GH78
pfam HRGMv2_2046_9 HRGMv2_2046_9_63 67983 69659 - Big_2 | Big_2
STP HRGMv2_2046_9 HRGMv2_2046_9_64 70007 71962 + Pkinase
CAZyme HRGMv2_2046_9 HRGMv2_2046_9_65 72086 73105 + GH29
CAZyme HRGMv2_2046_9 HRGMv2_2046_9_66 73174 74511 - GH1
NULL(UNKNOWN) HRGMv2_2046_9 HRGMv2_2046_9_67 74532 74801 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_2046_9 HRGMv2_2046_9_68 74932 75393 - Glyco_hydro_43
TC HRGMv2_2046_9 HRGMv2_2046_9_69 75436 76311 - 3.A.1.1.29
TC HRGMv2_2046_9 HRGMv2_2046_9_70 76322 77215 - 3.A.1.1.29
Gene ID: HRGMv2_2046_9_62
Type: CAZyme
Location: 65205 - 67796 (-)
Gene ID: HRGMv2_2046_9_63
Type: pfam
Location: 67983 - 69659 (-)
Gene ID: HRGMv2_2046_9_64
Type: STP
Location: 70007 - 71962 (+)
Gene ID: HRGMv2_2046_9_65
Type: CAZyme
Location: 72086 - 73105 (+)
Gene ID: HRGMv2_2046_9_66
Type: CAZyme
Location: 73174 - 74511 (-)
Gene ID: HRGMv2_2046_9_67
Type:
Location: 74532 - 74801 (-)
Gene ID: HRGMv2_2046_9_68
Type: pfam
Location: 74932 - 75393 (-)
Gene ID: HRGMv2_2046_9_69
Type: TC
Location: 75436 - 76311 (-)
Gene ID: HRGMv2_2046_9_70
Type: TC
Location: 76322 - 77215 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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