Cluster: HRGMv2_2046_CGC11
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2046
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2046_5 | HRGMv2_2046_5_66 | 72156 | 74588 | + | GH94 |
| TC | HRGMv2_2046_5 | HRGMv2_2046_5_67 | 74752 | 75609 | - | 3.A.1.1.45 |
| TC | HRGMv2_2046_5 | HRGMv2_2046_5_68 | 75615 | 76508 | - | 3.A.1.1.36 |
| STP | HRGMv2_2046_5 | HRGMv2_2046_5_69 | 76635 | 77990 | - | SBP_bac_1 |
| pfam | HRGMv2_2046_5 | HRGMv2_2046_5_70 | 78474 | 79667 | - | DHHW | ALGX |
| TC | HRGMv2_2046_5 | HRGMv2_2046_5_71 | 79680 | 81101 | - | 2.A.50.2.1 |
Gene ID: HRGMv2_2046_5_66
Type: CAZyme
Location: 72156 - 74588 (+)
Type: CAZyme
Location: 72156 - 74588 (+)
Gene ID: HRGMv2_2046_5_67
Type: TC
Location: 74752 - 75609 (-)
Type: TC
Location: 74752 - 75609 (-)
Gene ID: HRGMv2_2046_5_68
Type: TC
Location: 75615 - 76508 (-)
Type: TC
Location: 75615 - 76508 (-)
Gene ID: HRGMv2_2046_5_69
Type: STP
Location: 76635 - 77990 (-)
Type: STP
Location: 76635 - 77990 (-)
Gene ID: HRGMv2_2046_5_70
Type: pfam
Location: 78474 - 79667 (-)
Type: pfam
Location: 78474 - 79667 (-)
Gene ID: HRGMv2_2046_5_71
Type: TC
Location: 79680 - 81101 (-)
Type: TC
Location: 79680 - 81101 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Limivivens
Species
Limivivens faecihominis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.