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Cluster: HRGMv2_2043_CGC23

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2043_11 HRGMv2_2043_11_54 53778 55190 + 2.A.50.2.1
pfam HRGMv2_2043_11 HRGMv2_2043_11_55 55295 56428 + DHHW | ALGX
TC HRGMv2_2043_11 HRGMv2_2043_11_56 56528 59299 - 3.A.1.122.2
pfam HRGMv2_2043_11 HRGMv2_2043_11_57 59654 60646 + A_deaminase
NULL(UNKNOWN) HRGMv2_2043_11 HRGMv2_2043_11_58 60646 61545 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2043_11 HRGMv2_2043_11_59 62004 66902 + GH18 | GH18 | GH18
NULL(UNKNOWN) HRGMv2_2043_11 HRGMv2_2043_11_60 67387 67560 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2043_11 HRGMv2_2043_11_61 67584 68600 + 3.A.7.13.2
Gene ID: HRGMv2_2043_11_54
Type: TC
Location: 53778 - 55190 (+)
Gene ID: HRGMv2_2043_11_55
Type: pfam
Location: 55295 - 56428 (+)
Gene ID: HRGMv2_2043_11_56
Type: TC
Location: 56528 - 59299 (-)
Gene ID: HRGMv2_2043_11_57
Type: pfam
Location: 59654 - 60646 (+)
Gene ID: HRGMv2_2043_11_58
Type:
Location: 60646 - 61545 (+)
Gene ID: HRGMv2_2043_11_59
Type: CAZyme
Location: 62004 - 66902 (+)
Gene ID: HRGMv2_2043_11_60
Type:
Location: 67387 - 67560 (+)
Gene ID: HRGMv2_2043_11_61
Type: TC
Location: 67584 - 68600 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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