PROTEIN: HRGMv2_2043_11_58
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Protein File & Metadata
Source:
HRGMv2_2043_11_58.pdb
Genome ID:
Protein ID:
HRGMv2_2043_11_58
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Protein Sequence
MAEKVEFSSK QMLDWMGYIA DMLQISPEKI KLLNTCSKRR NVLATIATHK RVLIFADETN 60 ENMLYKLWEA GYGDYEMYYG QGYEPGEMKH CKVFELMDVN ISGPTVIFVV NENTRESMIF 120 GMKNENFSTG SVKYVGHEIR SVIMNKLEMD VRDTVLIASG ESIVIEASMV AYEGVVIAVE 180 RDKGSLASME ENAAKFGVHN VEIVSDLTEE TLKDKPVPRL AFLVAQKDTI EQDIVTLKKI 240 NPDMKIIIYT LELDILSDIP YLFKKHGVNL SEVMQISVSK TDKDSVFVAQ PAPWIISGE 299
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P9WGA9-F1-model_v4 | 1 | 299 | 50 | 388 | 0.7232 |
0.8347 |
| AF-K0F1M0-F1-model_v4 | 1 | 299 | 61 | 409 | 0.7088 |
0.8433 |
| AF-Q57836-F1-model_v4 | 48 | 299 | 1 | 182 | 0.7038 |
0.8907 |
| AF-Q9HZU0-F1-model_v4 | 1 | 299 | 61 | 404 | 0.7003 |
0.8301 |
| AF-A0A0H3GWZ3-F1-model_v4 | 122 | 299 | 1 | 183 | 0.6917 |
0.9105 |
| AF-Q05632-F1-model_v4 | 122 | 299 | 1 | 183 | 0.6834 |
0.9075 |
| AF-B0BNB3-F1-model_v4 | 31 | 299 | 1 | 208 | 0.5832 |
0.7061 |
| AF-Q9NRN9-F1-model_v4 | 31 | 299 | 1 | 208 | 0.5829 |
0.7058 |
| AF-Q8K1A0-F1-model_v4 | 31 | 299 | 1 | 208 | 0.5826 |
0.7055 |
| AF-F1QVR8-F1-model_v4 | 116 | 299 | 1 | 205 | 0.5799 |
0.7796 |
Structural Homologs - CAZyme3D-Whole
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - CAZyme-ID50
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 3e05-assembly2.cif.gz_H | 44 | 299 | 1 | 189 | 0.7127 |
0.892 |
| 3e05-assembly1.cif.gz_A | 47 | 299 | 1 | 186 | 0.711 |
0.8955 |
| 3e05-assembly2.cif.gz_F | 47 | 299 | 1 | 185 | 0.7097 |
0.8955 |
| 3e05-assembly2.cif.gz_C | 47 | 299 | 1 | 189 | 0.7068 |
0.8824 |
| 3e05-assembly1.cif.gz_G | 47 | 299 | 1 | 188 | 0.7035 |
0.88 |
| 1f38-assembly1.cif.gz_A | 121 | 299 | 1 | 185 | 0.6908 |
0.897 |
| 2yxd-assembly1.cif.gz_A | 119 | 299 | 1 | 179 | 0.6904 |
0.8803 |
| 3njr-assembly1.cif.gz_A | 114 | 299 | 1 | 183 | 0.6709 |
0.8502 |
| 3hm2-assembly1.cif.gz_D | 123 | 299 | 1 | 165 | 0.6536 |
0.8631 |
| 3hm2-assembly2.cif.gz_H | 123 | 299 | 1 | 166 | 0.6534 |
0.8585 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P9WGA9-F1-model_v4 | 1 | 299 | 50 | 388 | 0.7232 |
0.8347 |
| AF-P9WGA8-F1-model_v4 | 1 | 299 | 50 | 388 | 0.7196 |
0.8309 |
| AF-A3MWC5-F1-model_v4 | 43 | 299 | 1 | 194 | 0.7067 |
0.8735 |
| AF-A6UPM1-F1-model_v4 | 120 | 299 | 1 | 179 | 0.7058 |
0.8982 |
| AF-Q57836-F1-model_v4 | 48 | 299 | 1 | 182 | 0.7038 |
0.8907 |
| AF-A4FWV6-F1-model_v4 | 121 | 299 | 1 | 179 | 0.7025 |
0.8972 |
| AF-P61820-F1-model_v4 | 120 | 299 | 1 | 179 | 0.7013 |
0.8958 |
| AF-A9AA91-F1-model_v4 | 121 | 299 | 1 | 179 | 0.7009 |
0.8952 |
| AF-A6VGG1-F1-model_v4 | 120 | 299 | 1 | 179 | 0.7005 |
0.8947 |
| AF-Q9HZU0-F1-model_v4 | 1 | 299 | 61 | 404 | 0.7003 |
0.8301 |