Cluster: HRGMv2_2043_CGC18
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_2043
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2043_8 | HRGMv2_2043_8_26 | 25924 | 31311 | - | CBM32 | GH136 |
| sulfatase | HRGMv2_2043_8 | HRGMv2_2043_8_27 | 31408 | 32133 | - | S1_9 |
| NULL(UNKNOWN) | HRGMv2_2043_8 | HRGMv2_2043_8_28 | 32141 | 33010 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_2043_8 | HRGMv2_2043_8_29 | 32994 | 35318 | - | GH65 |
| TC | HRGMv2_2043_8 | HRGMv2_2043_8_30 | 35337 | 36209 | - | 3.A.1.1.47 |
| TC | HRGMv2_2043_8 | HRGMv2_2043_8_31 | 36211 | 37095 | - | 3.A.1.1.47 |
| TC | HRGMv2_2043_8 | HRGMv2_2043_8_32 | 37166 | 38491 | - | 3.A.1.1.47 |
| pfam | HRGMv2_2043_8 | HRGMv2_2043_8_33 | 38800 | 39996 | - | MFS_1 | MFS_2 |
| NULL(UNKNOWN) | HRGMv2_2043_8 | HRGMv2_2043_8_34 | 40429 | 40587 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_2043_8 | HRGMv2_2043_8_35 | 40598 | 42346 | - | CBM32 |
| TC | HRGMv2_2043_8 | HRGMv2_2043_8_36 | 42581 | 44335 | + | 9.B.33.1.1 |
Gene ID: HRGMv2_2043_8_26
Type: CAZyme
Location: 25924 - 31311 (-)
Type: CAZyme
Location: 25924 - 31311 (-)
Gene ID: HRGMv2_2043_8_27
Type: sulfatase
Location: 31408 - 32133 (-)
Type: sulfatase
Location: 31408 - 32133 (-)
Gene ID: HRGMv2_2043_8_28
Type:
Location: 32141 - 33010 (-)
Type:
Location: 32141 - 33010 (-)
Gene ID: HRGMv2_2043_8_29
Type: CAZyme
Location: 32994 - 35318 (-)
Type: CAZyme
Location: 32994 - 35318 (-)
Gene ID: HRGMv2_2043_8_30
Type: TC
Location: 35337 - 36209 (-)
Type: TC
Location: 35337 - 36209 (-)
Gene ID: HRGMv2_2043_8_31
Type: TC
Location: 36211 - 37095 (-)
Type: TC
Location: 36211 - 37095 (-)
Gene ID: HRGMv2_2043_8_32
Type: TC
Location: 37166 - 38491 (-)
Type: TC
Location: 37166 - 38491 (-)
Gene ID: HRGMv2_2043_8_33
Type: pfam
Location: 38800 - 39996 (-)
Type: pfam
Location: 38800 - 39996 (-)
Gene ID: HRGMv2_2043_8_34
Type:
Location: 40429 - 40587 (-)
Type:
Location: 40429 - 40587 (-)
Gene ID: HRGMv2_2043_8_35
Type: CAZyme
Location: 40598 - 42346 (-)
Type: CAZyme
Location: 40598 - 42346 (-)
Gene ID: HRGMv2_2043_8_36
Type: TC
Location: 42581 - 44335 (+)
Type: TC
Location: 42581 - 44335 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Eubacterium_G
Species
Eubacterium_G sp000434315
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2043_8_27 | vegan > omnivore | 3.25500 | 0.01598 |
| HRGMv2_2043_8_30 | vegan > omnivore | 1.33556 | 0.01598 |
| HRGMv2_2043_8_31 | vegan > omnivore | 1.58688 | 0.01598 |
| HRGMv2_2043_8_32 | vegan > omnivore | 1.49580 | 0.01598 |