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PROTEIN: HRGMv2_2043_8_28

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Protein File & Metadata
Download PDB File
Source:
HRGMv2_2043_8_28.pdb
Genome ID:
HRGMv2_2043
Protein ID:
HRGMv2_2043_8_28

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Detailed structural information will appear here after analysis...

Protein Sequence 
MSKKYKAIFF   DWDGTAVMSR   QAPVEEVVAA   MKPLLQQGVK   LVIVSGTTYD   KIAKGKLHEH 60
FTKEEASNLY   LGLGRGAYNY   EMVDGKPVVF   ADCIPDKNGL   LTIHDICYQV   HRELLEKYNL 120
ETDIVFSRPN   YCKIDLMVND   ERGDQLFMQE   DEMSRVKNIL   SEHGINGGLK   QMVSISEEIG 180
ERFGTKVSAT   CDAKYLEVGI   SCKSDNVNTI   LSKFESEGIK   AEECSYWGDE   YVGIEDGLFG 240
SDSFMKTEKT   KNGDFYDVSS   LEGSRPENVE   VLGGGVSTFV   NFLIEQGKR 289
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-Q4E4A3-F1-model_v4 4 289 2 245 0.7234 0.8108
AF-A4IDG8-F1-model_v4 3 289 2 246 0.718 0.8047
AF-Q38AW2-F1-model_v4 4 289 2 245 0.7161 0.8036
AF-Q9XUE6-F1-model_v4 4 289 7 254 0.7055 0.7925
AF-A0A077YZW5-F1-model_v4 4 289 4 250 0.7033 0.7889
AF-Q2FWA2-F1-model_v4 2 289 1 285 0.7012 0.7292
AF-Q7XPW5-F1-model_v4 4 289 6 247 0.6999 0.7958
AF-B4FR89-F1-model_v4 4 289 7 248 0.6992 0.7964
AF-Q9VTZ6-F1-model_v4 2 289 3 254 0.6966 0.7734
AF-Q32A04-F1-model_v4 4 289 1 266 0.6924 0.7407
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A4Y1YNB2-F1-model_v4 GT4 5 289 104 343 0.5841 0.7684
APR83787.1 GH65 1 289 23 315 0.5794 0.9217
AF-A0A1H1NBQ7-F1-model_v4 GH0 2 289 9 255 0.488 0.8018
AF-A0A385BK92-F1-model_v4 GH0 1 289 8 256 0.4877 0.7954
AF-A0A1U7DTH9-F1-model_v4 GH0 1 289 7 255 0.4875 0.7956
AF-A0A1H1LZ77-F1-model_v4 GH0 1 289 1 248 0.4846 0.7939
AF-A0A0P0D298-F1-model_v4 GH0 2 289 8 255 0.484 0.792
AF-B1ZT99-F1-model_v4 GH0 2 289 5 252 0.4817 0.7895
AF-Q3Z6S5-F1-model_v4 GT55 3 289 414 692 0.4815 0.7085
AF-A0A290QMX9-F1-model_v4 GH0 2 289 9 256 0.4812 0.791
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A0G9F9S7 GH73 4 289 2 256 0.5916 0.6571
APR83787.1 GH65 1 289 23 315 0.5794 0.9217
C0PKY3 GT4 5 289 330 615 0.485 0.6758
ADJ26179.1 GT55 4 289 421 700 0.481 0.7071
A0A077WG75 GT20 1 289 616 874 0.4729 0.792
A0A899FVS8 GT20 1 289 569 826 0.4706 0.7819
A0A375ANZ7 GT4 4 289 470 713 0.4701 0.7861
S9Q6Q4 GT20 1 286 566 852 0.4675 0.7109
A0A8A4TF10 GT20 1 289 487 741 0.4674 0.759
WBY16507.1 GT4 5 289 439 680 0.4655 0.7725
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
2i54-assembly1.cif.gz_A 5 289 1 242 0.7129 0.802
3l7y-assembly1.cif.gz_A 4 289 1 266 0.7051 0.7528
3pgv-assembly4.cif.gz_D 4 289 1 257 0.7028 0.7641
3pgv-assembly3.cif.gz_C 4 289 1 258 0.7022 0.7617
6i5x-assembly1.cif.gz_A 3 289 8 260 0.6977 0.778
3pgv-assembly1.cif.gz_A 5 288 1 259 0.6949 0.7527
1kyt-assembly1.cif.gz_A 3 288 1 225 0.6943 0.8041
4bnd-assembly2.cif.gz_B 3 289 1 253 0.6933 0.7665
4bnd-assembly2.cif.gz_A 3 288 1 252 0.6924 0.7662
1rlt-assembly4.cif.gz_D 5 289 1 263 0.689 0.7468
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-Q9XUE6-F1-model_v4 4 289 7 254 0.7055 0.7925
AF-P42962-F1-model_v4 1 288 5 249 0.7025 0.7884
AF-O29805-F1-model_v4 2 289 1 223 0.7013 0.8144
AF-A0B7J8-F1-model_v4 4 289 1 220 0.7012 0.8215
AF-A9CK30-F1-model_v4 2 289 1 248 0.7007 0.7764
AF-Q97C22-F1-model_v4 4 288 1 224 0.7005 0.812
AF-Q7XPW5-F1-model_v4 4 289 6 247 0.6999 0.7958
AF-A3CWU5-F1-model_v4 4 289 1 231 0.6979 0.8046
AF-Q9VTZ6-F1-model_v4 2 289 3 254 0.6966 0.7734
AF-Q9HLQ2-F1-model_v4 4 288 1 224 0.6958 0.8071
Download Full SwissProt Results