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Cluster: HRGMv2_2042_CGC44

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2042_67 HRGMv2_2042_67_6 2988 3860 - 1.A.23.2.1
CAZyme HRGMv2_2042_67 HRGMv2_2042_67_7 3864 6587 - CBM48 | GH13_9
NULL(UNKNOWN) HRGMv2_2042_67 HRGMv2_2042_67_8 6862 8097 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2042_67 HRGMv2_2042_67_9 8437 9741 - 3.A.1.5.19
TC HRGMv2_2042_67 HRGMv2_2042_67_10 9754 11502 - 3.A.1.5.19
TC HRGMv2_2042_67 HRGMv2_2042_67_11 11516 12484 - 3.A.1.5.19
TC HRGMv2_2042_67 HRGMv2_2042_67_12 12491 14062 - 3.A.1.5.32
Gene ID: HRGMv2_2042_67_6
Type: TC
Location: 2988 - 3860 (-)
Gene ID: HRGMv2_2042_67_7
Type: CAZyme
Location: 3864 - 6587 (-)
Gene ID: HRGMv2_2042_67_8
Type:
Location: 6862 - 8097 (-)
Gene ID: HRGMv2_2042_67_9
Type: TC
Location: 8437 - 9741 (-)
Gene ID: HRGMv2_2042_67_10
Type: TC
Location: 9754 - 11502 (-)
Gene ID: HRGMv2_2042_67_11
Type: TC
Location: 11516 - 12484 (-)
Gene ID: HRGMv2_2042_67_12
Type: TC
Location: 12491 - 14062 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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