PROTEIN: HRGMv2_2042_67_8
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Protein File & Metadata
Source:
HRGMv2_2042_67_8.pdb
Genome ID:
Protein ID:
HRGMv2_2042_67_8
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Protein Sequence
MGRTVKNPNR RLPKPVQKVW LSEKNVGRRI LLVVLLLAIG SGFLVYGFMN FLHGDSGWRE 60 ISVKAGTDLN CGEDFTLKYN VGASGVSAGG EAKALSLLYT DAAVKGYRLF NIDESFEDVT 120 NLYDINQHPN EVLTVDPVLY DALKKVSDAN CREIYLGPLY ASLENLCASN DDAAAAQFDP 180 NRNDAAAEET AAVAAFTQNP DDISLELSGE NQVCLHVSDA YQAYAAEMGY TAYLDFFWMK 240 NAFLIDYLAD TIRGEGYQLG IISSKDGFVR CLDETGEKEY RYPLYHLSGN EIQSYGTMTY 300 EGPKSIVFFH AYQAGSPDAY RYYQYQDKTM CTPYLSAADG KDHTAASELI VYSGEYGCAN 360 TLLAAFSDYQ AESLSRESLE TLTSQNIYSI WFENDEMQTT DEDLAVIVGN E 411
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q5F6X3-F1-model_v4 | 55 | 406 | 31 | 351 | 0.682 |
0.8154 |
| AF-P0AB85-F1-model_v4 | 56 | 408 | 32 | 350 | 0.6772 |
0.8137 |
| AF-Q32I15-F1-model_v4 | 56 | 408 | 32 | 349 | 0.6767 |
0.8158 |
| AF-P41780-F1-model_v4 | 55 | 407 | 30 | 348 | 0.6763 |
0.8117 |
| AF-Q4CQU6-F1-model_v4 | 55 | 408 | 38 | 372 | 0.5467 |
0.7849 |
| AF-A4IB12-F1-model_v4 | 55 | 407 | 40 | 377 | 0.4414 |
0.7797 |
| AF-Q4CMU8-F1-model_v4 | 55 | 406 | 38 | 371 | 0.4389 |
0.7831 |
| AF-A4IAY0-F1-model_v4 | 55 | 406 | 55 | 425 | 0.4369 |
0.752 |
| AF-Q57W38-F1-model_v4 | 55 | 406 | 38 | 371 | 0.4357 |
0.7764 |
| AF-Q38BN4-F1-model_v4 | 50 | 405 | 105 | 462 | 0.4326 |
0.7425 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| WED65993.1 | GT2 | 56 | 411 | 13 | 310 | 0.5107 |
0.7965 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| WED65993.1 | GT2 | 56 | 411 | 13 | 310 | 0.5107 |
0.7965 |
| A0A5B9W6L9 | GH171 | 48 | 411 | 15 | 558 | 0.4532 |
0.7468 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 4xdr-assembly1.cif.gz_A | 53 | 411 | 1 | 323 | 0.7252 |
0.834 |
| 4ifx-assembly1.cif.gz_A | 53 | 411 | 1 | 324 | 0.7238 |
0.8313 |
| 4xdu-assembly1.cif.gz_A | 53 | 411 | 1 | 324 | 0.7232 |
0.8307 |
| 4ifw-assembly1.cif.gz_A | 55 | 411 | 1 | 321 | 0.7231 |
0.8337 |
| 1vrm-assembly1.cif.gz_A | 57 | 407 | 1 | 309 | 0.7184 |
0.8356 |
| 7f39-assembly1.cif.gz_A | 55 | 411 | 3 | 316 | 0.7174 |
0.8376 |
| 7f2u-assembly2.cif.gz_B | 55 | 411 | 3 | 314 | 0.7166 |
0.8396 |
| 7mgt-assembly1.cif.gz_A | 53 | 411 | 1 | 313 | 0.7162 |
0.8348 |
| 7esb-assembly1.cif.gz_A | 55 | 410 | 2 | 311 | 0.7127 |
0.8352 |
| 6nxi-assembly1.cif.gz_A | 55 | 405 | 1 | 309 | 0.7102 |
0.8253 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q89AP6-F1-model_v4 | 55 | 407 | 26 | 341 | 0.6926 |
0.8281 |
| AF-O85292-F1-model_v4 | 55 | 408 | 25 | 340 | 0.6925 |
0.8269 |
| AF-P0AB86-F1-model_v4 | 50 | 408 | 28 | 349 | 0.6791 |
0.8096 |
| AF-P0AB85-F1-model_v4 | 56 | 408 | 32 | 350 | 0.6772 |
0.8137 |
| AF-P41780-F1-model_v4 | 55 | 407 | 30 | 348 | 0.6763 |
0.8117 |
| AF-B5XP00-F1-model_v4 | 55 | 408 | 30 | 348 | 0.6751 |
0.8109 |
| AF-Q52718-F1-model_v4 | 7 | 411 | 46 | 500 | 0.6291 |
0.7266 |