Cluster: HRGMv2_2042_CGC35
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2042
- CGC Family ID: CGCFAM_00009
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2042_29 | HRGMv2_2042_29_19 | 24175 | 26619 | - | GT2 | GT2 |
| CAZyme | HRGMv2_2042_29 | HRGMv2_2042_29_20 | 26619 | 29144 | - | GT2 | GT2 |
| NULL(UNKNOWN) | HRGMv2_2042_29 | HRGMv2_2042_29_21 | 29152 | 30549 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_2042_29 | HRGMv2_2042_29_22 | 30551 | 31477 | - | Ubie_methyltran | MTS | Methyltransf_11 | Methyltransf_12 | Methyltransf_23 | Methyltransf_25 | Methyltransf_31 |
| TC | HRGMv2_2042_29 | HRGMv2_2042_29_23 | 31488 | 32849 | - | 3.A.1.103.6 |
| TC | HRGMv2_2042_29 | HRGMv2_2042_29_24 | 32931 | 34343 | - | 3.A.1.104.1 |
Gene ID: HRGMv2_2042_29_19
Type: CAZyme
Location: 24175 - 26619 (-)
Type: CAZyme
Location: 24175 - 26619 (-)
Gene ID: HRGMv2_2042_29_20
Type: CAZyme
Location: 26619 - 29144 (-)
Type: CAZyme
Location: 26619 - 29144 (-)
Gene ID: HRGMv2_2042_29_21
Type:
Location: 29152 - 30549 (-)
Type:
Location: 29152 - 30549 (-)
Gene ID: HRGMv2_2042_29_22
Type: pfam
Location: 30551 - 31477 (-)
Type: pfam
Location: 30551 - 31477 (-)
Gene ID: HRGMv2_2042_29_23
Type: TC
Location: 31488 - 32849 (-)
Type: TC
Location: 31488 - 32849 (-)
Gene ID: HRGMv2_2042_29_24
Type: TC
Location: 32931 - 34343 (-)
Type: TC
Location: 32931 - 34343 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Fusicatenibacter
Species
Fusicatenibacter sp900772675
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.