PROTEIN: HRGMv2_2042_29_21
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Protein File & Metadata
Source:
HRGMv2_2042_29_21.pdb
Genome ID:
Protein ID:
HRGMv2_2042_29_21
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Protein Sequence
MNHTTEEILY IKYANERNRE FAVRTEILEN IDGKRSVKKT PLYPEGKAHV AGLMEKYRRL 60 EPDYEKVGLF CNRAEADGES VRLEYLMGES MEEYLDALLN RKKKEEAEKL LKQYIEKIQA 120 LPGQESFCMT EDFKEVFGDA KGLETMASVS NANIDMVCQN VMMDEDRWTM IDYEWTFFFP 180 VPTAFLVYRV LHYYLETHGK RSVFNKEAMY TWAGITKEER EVFHEMEHHF QRHLTSEHVP 240 MREMYGAISP GTYPVHHLVT KEQIRRGQER MQVFFSDEKG FREERSVYYR LENGEFHGTI 300 EIPEHTDEIR LDPCDGMGLC QIEELSFDTG TMGEIVVSDG ITGDGEAYLM NAPDPQFYLG 360 KVPKGAKKLT IHLRVVVTEA DSVKINEFAG KLLANGEERL KKQKEKQQQK EARLKQEAEE 420 NFSRQAEEIA RLQMELARKT EKIEQMEQTK VWKLYRKYRT IRERN 465
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-Q9AGZ0-F1-model_v4 | GT2 | 6 | 243 | 1 | 240 | 0.4098 |
0.8863 |
| A0A4P9E9V2 | GT2 , GT4 | 1 | 404 | 64 | 659 | 0.3724 |
0.6826 |
| AF-D9R088-F1-model_v4 | GT2 , GT4 | 5 | 269 | 1 | 753 | 0.3711 |
0.8741 |
| A0A239QLG0 | GT2 | 5 | 257 | 1 | 274 | 0.3631 |
0.8696 |
| A0A2T4T973 | GT2 , GT4 | 3 | 415 | 49 | 857 | 0.3497 |
0.5688 |
| QWT52131.1 | GT2 | 5 | 293 | 1 | 440 | 0.3418 |
0.7436 |
| A0A829WPC6 | GT2 , GT4 | 2 | 262 | 52 | 521 | 0.3375 |
0.8628 |
| C6LFR9 | GT2 , GT4 | 1 | 392 | 64 | 645 | 0.3328 |
0.6285 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A4P9E9V2 | GT2 , GT4 | 1 | 404 | 64 | 659 | 0.3724 |
0.6826 |
| A0A239QLG0 | GT2 | 5 | 257 | 1 | 274 | 0.3631 |
0.8696 |
| A0A2T4T973 | GT2 , GT4 | 3 | 415 | 49 | 857 | 0.3497 |
0.5688 |
| QWT52131.1 | GT2 | 5 | 293 | 1 | 440 | 0.3418 |
0.7436 |
| A0A829WPC6 | GT2 , GT4 | 2 | 262 | 52 | 521 | 0.3375 |
0.8628 |
| C6LFR9 | GT2 , GT4 | 1 | 392 | 64 | 645 | 0.3328 |
0.6285 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.