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Cluster: HRGMv2_2041_CGC51

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2041_23 HRGMv2_2041_23_16 22208 23158 + 3.A.1.1.29
TC HRGMv2_2041_23 HRGMv2_2041_23_17 23171 24103 + 3.A.1.1.29
pfam HRGMv2_2041_23 HRGMv2_2041_23_18 24199 25650 + DUF3502
CAZyme HRGMv2_2041_23 HRGMv2_2041_23_19 25761 27050 + GH125
pfam HRGMv2_2041_23 HRGMv2_2041_23_20 27443 27961 + VanZ
pfam HRGMv2_2041_23 HRGMv2_2041_23_21 28029 29723 + PDDEXK_9 | AAA-ATPase_like
TC HRGMv2_2041_23 HRGMv2_2041_23_22 29852 30430 + 2.A.78.1.1
TC HRGMv2_2041_23 HRGMv2_2041_23_23 30385 30708 + 2.A.78.1.1
Gene ID: HRGMv2_2041_23_16
Type: TC
Location: 22208 - 23158 (+)
Gene ID: HRGMv2_2041_23_17
Type: TC
Location: 23171 - 24103 (+)
Gene ID: HRGMv2_2041_23_18
Type: pfam
Location: 24199 - 25650 (+)
Gene ID: HRGMv2_2041_23_19
Type: CAZyme
Location: 25761 - 27050 (+)
Gene ID: HRGMv2_2041_23_20
Type: pfam
Location: 27443 - 27961 (+)
Gene ID: HRGMv2_2041_23_21
Type: pfam
Location: 28029 - 29723 (+)
Gene ID: HRGMv2_2041_23_22
Type: TC
Location: 29852 - 30430 (+)
Gene ID: HRGMv2_2041_23_23
Type: TC
Location: 30385 - 30708 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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