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Cluster: HRGMv2_2041_CGC50

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2041_22 HRGMv2_2041_22_28 31561 33663 - 3.A.7.7.1
TC HRGMv2_2041_22 HRGMv2_2041_22_29 33660 34418 - 1.A.16.2.1
TF HRGMv2_2041_22 HRGMv2_2041_22_30 34866 36065 - HTH_AraC
CAZyme HRGMv2_2041_22 HRGMv2_2041_22_31 36286 38736 + GH148
TC HRGMv2_2041_22 HRGMv2_2041_22_32 38829 40262 + 2.A.2.3.6
CAZyme HRGMv2_2041_22 HRGMv2_2041_22_33 40378 42726 + GH94
CAZyme HRGMv2_2041_22 HRGMv2_2041_22_34 42776 45199 + GH3
CAZyme HRGMv2_2041_22 HRGMv2_2041_22_35 45200 47614 + GH3
Gene ID: HRGMv2_2041_22_28
Type: TC
Location: 31561 - 33663 (-)
Gene ID: HRGMv2_2041_22_29
Type: TC
Location: 33660 - 34418 (-)
Gene ID: HRGMv2_2041_22_30
Type: TF
Location: 34866 - 36065 (-)
Gene ID: HRGMv2_2041_22_31
Type: CAZyme
Location: 36286 - 38736 (+)
Gene ID: HRGMv2_2041_22_32
Type: TC
Location: 38829 - 40262 (+)
Gene ID: HRGMv2_2041_22_33
Type: CAZyme
Location: 40378 - 42726 (+)
Gene ID: HRGMv2_2041_22_34
Type: CAZyme
Location: 42776 - 45199 (+)
Gene ID: HRGMv2_2041_22_35
Type: CAZyme
Location: 45200 - 47614 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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