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Cluster: HRGMv2_2041_CGC35

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2041_8 HRGMv2_2041_8_116 128948 130678 + 8.A.59.2.1
TC HRGMv2_2041_8 HRGMv2_2041_8_117 130675 132420 + 3.A.1.1.9
pfam HRGMv2_2041_8 HRGMv2_2041_8_118 132698 134011 + SBP_bac_8
TC HRGMv2_2041_8 HRGMv2_2041_8_119 134113 135486 + 3.A.1.1.27
TC HRGMv2_2041_8 HRGMv2_2041_8_120 135486 136364 + 3.A.1.1.27
CAZyme HRGMv2_2041_8 HRGMv2_2041_8_121 136949 140914 + GH133 | GH13_14
Gene ID: HRGMv2_2041_8_116
Type: TC
Location: 128948 - 130678 (+)
Gene ID: HRGMv2_2041_8_117
Type: TC
Location: 130675 - 132420 (+)
Gene ID: HRGMv2_2041_8_118
Type: pfam
Location: 132698 - 134011 (+)
Gene ID: HRGMv2_2041_8_119
Type: TC
Location: 134113 - 135486 (+)
Gene ID: HRGMv2_2041_8_120
Type: TC
Location: 135486 - 136364 (+)
Gene ID: HRGMv2_2041_8_121
Type: CAZyme
Location: 136949 - 140914 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_2041_8_116 vegan > omnivore 1.02020 0.03618
HRGMv2_2041_8_119 vegan > omnivore 1.03931 0.01210

🧭 Explore Read Mapping of CGC

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