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Cluster: HRGMv2_2041_CGC26

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2041_5 HRGMv2_2041_5_43 42494 43441 - GT2
STP HRGMv2_2041_5 HRGMv2_2041_5_44 43438 44412 - PALP
peptidase HRGMv2_2041_5 HRGMv2_2041_5_45 44769 45887 - M20.UPB
TC HRGMv2_2041_5 HRGMv2_2041_5_46 45923 46681 - 3.A.1.3.13
TC HRGMv2_2041_5 HRGMv2_2041_5_47 46668 47420 - 3.A.1.3.10
pfam HRGMv2_2041_5 HRGMv2_2041_5_48 47436 47936 - Acetyltransf_1 | FR47 | Acetyltransf_7 | Acetyltransf_10
TC HRGMv2_2041_5 HRGMv2_2041_5_49 48032 48955 - 3.A.1.3.13
Gene ID: HRGMv2_2041_5_43
Type: CAZyme
Location: 42494 - 43441 (-)
Gene ID: HRGMv2_2041_5_44
Type: STP
Location: 43438 - 44412 (-)
Gene ID: HRGMv2_2041_5_45
Type: peptidase
Location: 44769 - 45887 (-)
Gene ID: HRGMv2_2041_5_46
Type: TC
Location: 45923 - 46681 (-)
Gene ID: HRGMv2_2041_5_47
Type: TC
Location: 46668 - 47420 (-)
Gene ID: HRGMv2_2041_5_48
Type: pfam
Location: 47436 - 47936 (-)
Gene ID: HRGMv2_2041_5_49
Type: TC
Location: 48032 - 48955 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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